Ixodes scapularis (black-legged tick): 115323227
Help
Entry
115323227 CDS
T01131
Name
(RefSeq) protein capicua homolog isoform X1
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
Activator_LAG-3
HMG_box_2
TFIIA
Omp_AT
Motif
Other DBs
NCBI-GeneID:
115323227
NCBI-ProteinID:
XP_029839464
EnsemblRapid:
LOC115323227
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MDRGVTSSYQSSLDLKRKAEEKLLLEGPTVVQQLDISSLHRKKSAESGYEEEESRLDDEL
KKAASKLPKKRKFDFDFAEVDPPYGVRKGSSTADLAPAVDLRDWKGQRVLVRLRDVYEPA
VIKDIAGDRDVVVQVDSCQRQLFCIKDVFDSARLDIISDHSPSLGQVSVGMDVCVRVEET
VYAEGVVVEITSRPPVQYRVRFPRRPGCVMSDTLSVPRAGLRLKQPPWREELESVSPLFT
VREPPPHMLNPPVHLCEDGMGAVMPPGALPSHNVSVITESVHRPLPVPMLIPFDLDRSSS
ELLTAQRIRKLTLGSSSPTNAEDDSSDDDLKTGRIEFDPNPSPSRPNYCRDNNNLTPRSR
LATSSSAEMRVLTPRSPASAASAQQKYKKGDIVSTPNGIRKKFNGKQWRRLCSKEGCTKE
SQRRGYCSRHLSLKGKASGNGAPRKPGSSQQHPFQPGRLGSGREWEESSRESDTSPGDRG
GSRVQGRFDLDETEAANMLVSLGNSRSATPSSASPPGRPELFAPIRHASASLWPPDPAVL
SPESKFRPTAVVVHRPRVVKTSEPVSVIQHSLPEAVAHKLQTAAALSEQQTAAQMVLLQQ
ALQGSARASLGDMPTYGTIQLAPGAVKGPEREACGSINGQVAAVALQTSQHMQHHPSPAH
LLPVMPVVVANGEPDKEEAVLDSSGGNWNDGKPIPVFPWHSLVPFLGTHPSPPSSAPPTV
TTAPVVPDTTLQAAGGTDQEEGDDDVFDTTDSPTAIVPPSTKRRSQSLSALPKDDLKSPR
KAKEKDHIRRPMNAFMIFSKRHRALVHKRHPNQDNRTVSKILGEWWYALNPSEKQQYHDL
AFKVKEAHFKAHPDWKWCSRDRKKSSLGGPQCKDVRKCLSTSDDLGGTLASGDSLDQHED
NQKEDLTVTKNGESSDNCALPASWAEAASESSINSAVMGSITDKDGDASSDDERMIICED
EGDMEPAIDLQCKERVAESDSEGGTSDASPRLSPLGTGPPPGEVTHRPTPILREPAPLRE
APRPMGPHLAFQPTGAVFRDVHSPKKRAPALSEDRQQREVAAASPLRTTSNPVPILSKPM
YGHLGHTLLVPGASQYTLLSPPPSKGDRAAPLTGVMFRPGMPPSPDGGAPVRQLHMAPTQ
VQYLLPSSISLQPSPAGVKSVLQMAIPSGSIQLGTPNTTAVSKILTSPPVMASSPSSPSV
QGVIVGKDVLAPQLISLGGGPLPPQIQVTPAEPPAVGSPRLLSSAAGTHCLVLPSPDRRS
HSPSSSPHPPGVLKVHSTHSAKDGRDSPRSALTPPAPPPPLGSKVAVVTNSQGVLPSSSP
LSCSLARSRVSPFFTGVLSMKSGNLTPTEPKLDSSPRSHRTKTLTASAIMLLDSRLQPDK
SDDFKSSSRASPERTSRGSKKTTELGDKMQQSPLSLPSLEEQRHLQQQLQQQHHQQQQQQ
HHQQQQQHHQQQQQQHHQQQQQQHHQQQQQLQHHQQQQQALQLHQQWRLPQPPPDVPSGQ
GEASDGWPRDQPRFVLAPTPAQLGRAPGQLNPRKSSTESSRTADLSDESSRAPPAPQARE
DPPPEAPDLREEAGSCGPPSAREVRKSILKRTVDDGMDRVLEEVNFNAQFAKLPEFKPEE
SPSGATSLPSSPFVQTYRKRPKATGPEVEECEASSPGGRMPKSSPVGTPRTPKTGSKLEG
TTFFGPSFSLDALVDVGARNDALDGGDMGSPRTPKTPADGEKSHSSLRRTLEQRRQLVMQ
LFADEGWFPSAQATAAFQQRHREVFNNKNTLQLKIREVRQKLMAQNNQGSVATTPNAHEG
ASEAASTPLPAPSPATKPPTEAQRSEAQKPDPATPRSAT
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atggatagaggagtcacgagttcctaccaaagctccctggacttaaaaaggaaagcggag
gagaagctgctgctcgagggaccaactgtggttcaacagttggacattagctctctgcat
cgcaagaagtcggccgagtcgggatacgaggaggaagagtcaaggctggacgacgaacta
aaaaaggctgcgagcaagctgccgaagaagcgcaagtttgactttgactttgccgaggta
gaccccccgtatggcgttcggaagggaagcagcacggcggacctcgccccggccgtcgac
ctgcgggactggaagggtcagcgcgtgctggtgcgtctcagggacgtgtacgagccggca
gtgataaaagacattgcgggcgaccgggacgtggtggtccaggtggacagctgccagcgg
cagctgttctgcataaaggatgtgtttgattcggctcgcctggacatcatcagcgaccac
agtccgtctttgggacaggtctctgttgggatggatgtgtgtgtgcgcgtcgaagagaca
gtctacgccgagggagtggtggtggagataacgtcgcgtccccccgtccagtaccgtgtc
cgcttccctaggagacccggctgtgtgatgagtgatacgctgtcggtgcctcgtgcgggg
ctgcgcctcaagcagcccccctggagggaggagctggagtctgtgtctccactcttcact
gtgcgcgaaccgccgccgcacatgctgaaccctcctgtgcacctatgcgaggacggcatg
ggtgcggtgatgcctcccggggcattgccttcacacaacgtctcagtcatcacggagagc
gtccaccgcccgctgcctgtgccgatgctaatcccgtttgacctcgaccggtcctcgagt
gaactcctgacggcccagcgcatccgcaagttaaccctgggcagctcttccccgaccaac
gctgaagacgactcctcggacgacgacctcaagacggggcgcattgagttcgaccctaac
ccgagcccgtctcgtcccaactattgtcgcgacaacaacaaccttaccccacgttcgcgc
ctggccacctcctcgtctgcggagatgcgcgtgctaacgccgcggtcgccagcatccgct
gcgtctgctcaacagaagtacaagaagggagacattgtatccacaccgaacggtatccgc
aagaagttcaatggcaagcagtggcggcggctctgctccaaggaaggctgtaccaaagag
tcgcaacgcagaggctactgctcgcgacacctttcgctcaagggtaaggccagtggcaat
ggcgcccctcggaaaccgggctcttcccagcagcaccccttccagcccggacggcttggc
tccggccgcgagtgggaagagtcgtcgcgggagagtgacacgagtcctggtgaccgcggc
ggaagtcgcgtgcaaggccgcttcgacttggacgagacggaggcggccaacatgctggtc
tcactggggaactcccggtctgcaacgccctcttcggccagtccgcccggaaggcccgag
ctttttgcccccatcaggcacgcatcggcgtccctttggcctcccgatccggctgtgctg
tctccagagtccaagttccggccgaccgcggtggtggttcaccggccgagagtggtgaag
acttcggagccggtctcggtcatccagcactcgctgcccgaggctgtggcccacaagttg
cagacggcagccgcattgagcgaacagcagacggcagcacagatggtgctcctgcagcag
gctctgcaagggagtgccagggccagtctcggggacatgccgacgtacggcacaatccag
ctggcgcccggagcggtcaagggtccagagcgagaggcctgtggcagcatcaacggacag
gtggccgcggtcgccttgcagacatcgcagcacatgcagcaccatccgagcccggcccac
ttgctgcccgtgatgcccgtcgtagtggccaatggggagcccgacaaggaagaggcagtt
ctcgattccagtgggggaaactggaacgacggcaaacccattccggtgtttccgtggcac
tccttggttcccttcctggggacgcatccgtcgcctccgagcagcgctccacctactgtg
accaccgcccctgtcgtgccagacacgaccctgcaagccgccggcggcaccgatcaagag
gaaggtgatgatgacgtgttcgacaccacggattctccaacagcaattgtgcctccgtcc
acaaaacggaggtcccagtcactcagtgcccttccgaaggatgacctcaaaagcccacga
aaggccaaggaaaaggaccacatccggcggcccatgaatgccttcatgatattcagcaag
cgccaccgggcactggttcacaagcgccacccaaaccaggacaaccgcacagtcagcaaa
atcctgggcgagtggtggtacgccctcaatccctcggagaagcagcagtatcacgacctt
gccttcaaggtgaaggaggcccacttcaaggcccacccggactggaagtggtgcagccgg
gaccggaagaagtcgagcctcgggggaccccagtgcaaggatgtgcgaaagtgcctcagc
acctcggacgacctgggcggcaccctggcctccggggacagcctcgaccagcacgaggat
aaccaaaaggaagatctgaccgtcaccaagaatggagaaagttctgataattgcgccctt
cctgcgtcgtgggccgaggctgcgtcggagtcttccatcaacagtgccgtcatgggaagc
atcacggataaggatggggacgcttccagcgacgatgagagaatgataatctgcgaggat
gaaggggacatggagcccgcgatcgacctgcagtgcaaggagcgggtggccgagagcgac
tcggagggcgggacgtcggacgcgtccccgcggctgtcccccctgggcacgggcccccct
ccgggggaggttacgcaccggcccacgcccattctgcgggagcctgcccccctccgggag
gccccccgccccatggggccccacctggctttccagcccactggggccgtcttcagggac
gtccactcgcccaagaagagggcccccgccctttcggaggacaggcagcagcgagaggtc
gccgcggcatccccactgcgcacgacctccaacccggtgccgatcctgtctaagcccatg
tatgggcacctgggccacaccctgctggtgcccggggcatcccagtacacccttctgagc
cccccgccgtccaagggtgaccgggcggcacccctgaccggcgtgatgttcaggccgggc
atgcccccctcgcccgacggcggggctcccgtgcgccaactccacatggcccccacccaa
gtgcagtacctgctgccgtcctccatctcgctccagccgtccccggcgggggtcaaaagc
gtgctgcagatggccattccctctgggagtattcagctgggcaccccaaacaccacggct
gtcagcaaaatactgacgtcacctccggtcatggcatccagtccctcgagcccgtcggtg
caaggcgtgatcgtgggcaaggacgtgctggcccctcagctgatctcgctcgggggcggg
cccctgcccccccagatccaggtgacccccgccgaacccccggcggtcggctccccgcgg
ctgctctcgtctgcggccggaacccactgcctcgtcctgccgtcgcccgacaggcgaagt
cattccccatcatcttcgccccaccccccaggcgtactgaaggttcactcgactcattct
gcaaaggacggcagagactccccgcgctcggcgctaacccctcccgccccgccgccgccc
ctcggctcgaaagtggccgttgtcacaaacagccagggcgtgcttccgtccagctctcct
ctgagctgttctctggccaggtcgcgcgtttcaccctttttcacgggggtgctttccatg
aaatccggtaacctcaccccaacggaaccaaagctggactctagccctcgatctcatagg
accaagacactcactgcctccgccattatgctcctagattcgagactacaacccgacaag
tctgacgatttcaaatctagtagcagagcatcaccagagaggacttcgagggggagcaaa
aagaccacggagctcggcgacaaaatgcagcaaagcccgctgtcgctgccttccctcgaa
gagcagcgacacctacagcaacagctgcagcaacagcatcatcagcagcagcagcaacag
catcatcagcagcagcaacagcatcatcagcagcagcagcagcagcatcatcagcagcag
cagcaacagcatcatcagcaacagcagcaactgcaacatcatcaacagcaacagcaggcg
ctgcagctgcatcagcagtggcgcctcccgcagcctcctcctgacgtgcccagcggccag
ggggaggcgagtgacggctggccccgggaccagccccgcttcgtgctggccccgacgccg
gcccagctgggacgggcgcccgggcagctcaacccccgcaagagctcgacggagtcctcg
cgcaccgcggatctcagcgacgagtctagtcgggccccgccggccccccaggccagggag
gaccccccgccagaggcacccgatctcagggaggaggccggcagctgcggcccccccagt
gccagggaggtcaggaagtccatcctcaagcgtaccgtggacgacgggatggacagggtg
ttggaagaggtcaacttcaacgctcagttcgccaagctcccagagttcaagccagaagaa
tctccgtccggggccacttcgttgccttcctctccatttgtacagacataccgaaagcgg
cccaaggcgacagggccggaggtggaggagtgcgaggcgtcttccccgggtgggcgcatg
cccaagagttcccccgtgggcaccccccggacccccaagacgggctccaagctggaaggg
accaccttcttcggccccagcttcagcctcgacgcgctggtcgacgtcggcgcccgcaac
gatgccttggatggaggtgacatgggctcaccaagaaccccaaagacaccggccgacggg
gagaagagccactcgtcactgcgccgtaccctggagcagcggcgccaactggtcatgcag
cttttcgccgacgagggctggtttccgtcggcgcaagcgaccgccgcctttcagcaacgc
caccgcgaagtgttcaacaataagaacaccctgcagctgaagatccgcgaggtgcggcag
aagctgatggcccagaacaaccagggcagtgtggccaccacgcccaacgcacacgagggc
gcctccgaggccgcctccactccgctgcccgccccgtcccccgccaccaaacctcccacc
gaggcacagcgctccgaggcccagaagcccgatcccgcgactccgcgaagtgccacgtaa
DBGET
integrated database retrieval system
