Ixodes scapularis (black-legged tick): 8040379
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Entry
8040379 CDS
T01131
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
Organism
isc
Ixodes scapularis (black-legged tick)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Big_9
Cadherin_4
FecR
Laminin_G_3
hEGF
EGF
Metallothi_Euk2
Motif
Other DBs
NCBI-GeneID:
8040379
NCBI-ProteinID:
XP_040067343
EnsemblRapid:
LOC8040379
LinkDB
All DBs
Position
Unknown
AA seq
2371 aa
AA seq
DB search
MRRGQCAAGAAAAGAAVDSRGPDAVMDASSATQTKKGTPLSSPVSSLLLFFLLVGIGSAS
GREASFLGDGFVSLELEDARESTDLSLRFKTVRPDGLLLLAAGPDDHLLLQLTAGRLRLR
LELGAGEPASLDSPPGVRFDDGLWHALSLQRHGSSTLLLLDGLHESRLDLPPRFVQLDVK
WGLFAGGLGDFQDLFLGHLQPFRGCMADVLFNDVDLFESAVSSEGVTWGDCAGEFSAVVD
QAFSLVEADAFLALARPIARTGGSLSLEVRTQAQFALVAYCAGPPSKEDFVALEIVQGHP
IASLNQGNGVVTLRSETTVSDGAWHRLGLHFGPSHVELSVDGQVQSLRTGLGRNQFFDLA
GHLYLGGLDVASQSRAVLQHGLQSETSLRGCLRHGQVNDKPVGLPDALVTRGLKPDCVWE
FPCLQDPCQPGARCVQDGTDGFRCLCAPDGEEESESVADDCVRANFTGPYRVFASLDELL
ALAPLRVAEGGSDVVTTEHIKLLVDYRELGVSDTGVLFHVMDPPKHGALEIEVWHRGTPD
NVFTFADLETRKVRYTHDGSENHGDSVVFELEFRSRSFDLPASLQRRRRFVLHVLVSPVN
DAPRVKVPPGKVLRLAKGTRKLLTSELLEADDEDTKPSELVYKVLSLGDTDKDGFMEHAD
RPGEPLRSFTQEDIDRRLVSFVHRGREAESHVALGVSDGGSEAQSQTVVLRVQAFDLALS
LANNTGLVLARGGWTALSTTNLSAVTNAPDQSLDIRYEVTQPPRHGTIERLKSTGRWSPV
GHFSQRHIVRGKVRYTDTSSGDALPSEGLQDLFQFWISSSGKREGPFDFRLSFESVQAVH
NEQLTLEGILEGVVSAAHLTYTSWPSPSSPDVVVYTLEQPPQMGNLVITSTPMSSSMESP
SPLGAGDQFTQRQIDQGVLRYQLRRRALVRVSDSFRFHVSAGGGAQARDQEFRVCHLPKD
AVLVSEELTVTEGGQATLGGLRPLLQGRQARFNVTRLPSHGELRLLDDTLSQVEARPVVN
FTSDQLDAKRLIYRHDDSEHERDEFDFVAYAEGERLLYGTFKVSVSMRNDNPPVRVVDRV
FQVVADSERPLTSQDLKYEDVDSPPSDIQYTRRDIPNGALFHADNMGAQVYHFSQADLDA
GKIVFRHSGPPSARALLWVTDGQYYASGVLEIRASKPFLRVSRNTGLVVRRGDAAPLSSA
NLSAETNLRAGPGAIAYKVTSHPRRGLLLVGGAEARQFSQGDLDSQAVEYESADPGGGQG
EESAYQDSFEFVAFLGDTTSAPSTFRLTVYPDNFWEPLHVLRNGTLFVDQGGSAVLDASM
LLVTHPALDAANISFSVTQPLLSGRLLVEDRVVGSFSQADLDSGVVRFQHSGNLSQDRVV
LEVSNGIASRIQLELPVRVVPQAILLDTGNVSVTEGGQAALDSSHISAGPLRELLPQLLV
VEPPQHGRLSASAFSPEALDRGELRYRHDGSETSRDWFTVVARGPGRESLPGTVHVSVEP
VNDEAPYMANNTGLDLWEGAVSPISSTHLAAVDEDSEPAQLRFHISTPSNGYVALRNDTK
VPLLSFTQDQINRGLVVFVHTGACSPAGGFKFQVTDGLNQGSPHVFTVNARPLKIRLEHN
KTLSVLPGSQQSITRDHLLARTGDRNRDVSFVVVQQPRLGILLRENPQDGTLVQLSRFTQ
ADLDNYLVLYEHRAPMSQPVEHDSLQLDLVTANAAPVTGVLFGIRIALGDSVASLLGTLQ
VTEGGRTPLASALDVAGLQALWRGKPDVPPRLRLCVLSAPIRGWLELDQRNVTVPLCVAA
HRLDQLIYVHDDSETLEDSIRVGLFLASANGDRPDLALHNGTLRVTVHPVNDRPFTVETP
SPVVRVARGYRTTLSSSILKTSDEDGSSAQIVYQVLRQDEGASMFVLDGADVAAANFTQQ
DVDGGRVSLVHDGSTMTSDTLQLLVSDGVHPAVPVSLLIDVESVVLRVSNGTGLRLTQGD
ARVVISPTTIGASTNGDLQELVYNVTSEPQLGQLVFPDGAVADEFTHGDLKQGLVVYEQH
DLSGPRDSFVVTVSCRQVPPVVHRVEVKVEALVRQRPLVVQTGRFALVTVDHLDASKLAA
RTNSMPRYRVTRSPTLGLLLLSGSPNPALEFTHEDILNETLVYHSHAKGATTSRGDHFDF
ELTAAGVQPGIGRFLIHLQPPSTVASATTPSTRDANDNNNDTGTERPPGIIETGIRVPLL
TNDHLVVIGVAAGILLLLTVIAVVGVACGACRSRGGTGEKPRDSTGSRLSSARGPGMPLE
ETPSPPAAPPTSPSSTSSEPVPGVPDMDCLPPPYAGSTEVSPAVPTCKVTPLGHPEALKA
PSEAASESDDWNGEVRFSAPTTVLRKNQYWV
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagagggcaatgcgctgcgggcgcagcagcagccggtgcggctgtggatagccgg
ggccccgacgccgtcatggatgcctcctcggcgacgcagacgaaaaaaggaaccccgctg
tcgagcccggtctcgagcctcctcctcttcttcctcctcgtgggaatagggtcagcctcc
ggtcgcgaggcgtccttcctgggcgacggcttcgtttccctggaactggaggacgcccgc
gaaagcacggacctgagcctgcgcttcaagaccgtccgacccgacggcctgctccttctg
gccgccggacccgacgaccacctgctcctccagctgaccgcgggccgcctcagactccgg
ctcgagctgggcgccggcgagccggcttcgctggacagccctccgggcgtccgcttcgac
gacggcctctggcacgccctgtcgctccagaggcacggctccagcacgctcctgctcctc
gacggcctgcacgagtccaggctggacctcccgcctcggtttgtccagctggacgtcaag
tgggggctctttgccggaggtctcggagacttccaagacctcttcctggggcatctgcag
ccttttcgcgggtgcatggcggacgtgttgttcaacgacgtggacctgttcgagtctgcc
gtgtcctcggaaggcgtcacctggggcgactgtgccggggagttctcggccgtcgtggat
caggcgttcagcctcgtggaagccgacgccttcttggccctggcgcggcccatcgcccgc
acgggcggttccttgtccctcgaggtgcgcacccaagcgcagttcgcgctggtcgcctac
tgcgccggaccgccgtccaaggaggacttcgtggccttggaaatcgtccagggacaccct
atcgcatcgctcaatcagggaaacggggtggtaaccctccgcagcgagacgacagtcagc
gacggcgcctggcaccgcctaggcctacactttggcccttcccacgtagaactgagtgtc
gatggtcaagtccaatccctccgcaccggactgggccgaaaccagttcttcgatctggct
ggccacctgtacctgggaggcctggacgtggcctcgcagtcaagggcagttctacaacac
ggcctacagtccgaaacttcccttcgaggctgcctgcggcatggacaggtcaatgacaag
cccgtggggcttccagatgcactcgtgacccgaggcttgaaaccggactgcgtctgggag
tttccctgccttcaggacccgtgtcagcctggtgcccgttgtgtacaggacggaacagac
ggcttccgttgtctctgcgcgcctgatggtgaagaggaaagtgaaagtgttgccgacgat
tgcgtccgggccaactttacgggcccgtaccgtgtgtttgcgtcgctggacgaactgctg
gccctggcgccgctccgcgtcgcagaaggcggtagtgacgtggtcacgacggagcacatc
aagcttctggtcgactacagggagttgggagtttcggatactggcgttctgttccacgtc
atggatccgccgaagcatggtgctctggagatcgaggtgtggcatcgtgggactcccgac
aacgtgttcaccttcgcggacctggagacgcggaaagtgcgctacacgcacgacggttcg
gagaaccatggtgattcggtggtgtttgagctggagtttcggtccaggagttttgatctt
ccggcgtccctgcagcgacgccgacggtttgtgcttcatgtgctcgtgtcacccgtcaac
gacgcacccagagtcaaggttccgccgggtaaggtgcttcgactggcaaaaggcacccgc
aaactcttgacgtccgaactgctggaggcggacgacgaggacaccaaaccctccgagctg
gtctataaggtgctgagcttgggggacacagacaaggacggcttcatggaacacgccgac
aggcctggagaaccgctgaggtccttcacacaggaagacatcgaccgacgcctggtgagc
ttcgtgcaccggggaagggaagccgagtcccacgtggccctgggggtctcggacggcggc
tcggaggcccagtcgcagaccgtggtgctccgggtccaagccttcgacctggccctctcc
ctggccaacaacacgggactggtcctggctcgcggaggctggacagccctgagcaccacc
aacctgtcggcggtgaccaacgcgcccgaccagagccttgacattcgttacgaggtaacg
cagcctcctcgccacggcactatcgagcgactaaaaagcacggggcgctggtcgcccgtg
ggccacttcagccaacgacacatcgtacgtggcaaggtccggtacacggacacgtcatcg
ggtgacgccctcccgtcagagggtctccaggacctcttccagttctggatatcaagctcc
ggcaagagggaaggacctttcgactttcgattgtccttcgagagcgttcaagccgtgcac
aacgagcagctcacgcttgagggtatcctcgagggcgtcgtgagcgcggcgcatctcacg
tacacatcttggccctctccttcttcgccagacgttgtcgtctacaccctggaacagccg
cctcagatgggaaacctcgtaattacgtccaccccgatgtcctcaagtatggagtctccg
agtcctctgggcgcaggagaccaattcacgcagcggcaaatcgaccagggcgtcctccgg
taccagctacgaagacgtgccttagtccgagtgtccgactcgttccggtttcacgtgtct
gccggaggtggtgcccaggcgagagaccaggagtttcgcgtgtgtcaccttcccaaggat
gccgtgctggtcagtgaggaactgaccgtgaccgaaggaggacaggccacgctgggagga
ctgagaccgcttcttcaagggcgtcaggctcggttcaatgtcaccaggcttccgagtcac
ggagagctgcggttgcttgacgacacgttgagccaggtcgaagcgcgacccgtggtcaac
ttcacctctgaccagctggacgccaagagactcatctacagacacgacgactcggagcat
gagcgggacgagtttgacttcgtggcgtacgcagagggtgaacgcctcttgtacgggact
ttcaaggtgtccgtgtcgatgcggaacgacaaccctcccgtgcgtgttgtggaccgagtc
tttcaggttgtcgctgattcggagcgtccgctgacgtcccaagacctcaagtacgaggac
gtggattcgccaccgtccgatatccagtacacacggcgggacatccccaacggcgccctc
ttccacgcggacaacatgggcgcccaagtataccactttagccaagcggacctggacgct
ggcaagattgtgtttcgccacagcggcccaccgtcggccagggctctgctctgggtcacc
gatggccagtactacgcctccggcgtcctcgagatcagggcgtcaaaaccgtttctcagg
gtgtcccgaaacacgggactcgtcgtccgtcgcggtgacgctgcgcctctcagctcggcc
aacctgtcggcggagacgaacctgcgcgcgggtccgggcgccatcgcctacaaggtgacg
tcccatccccgtcggggactgctgctcgtcggaggcgccgaggcgcgtcagttcagccag
ggcgacctcgactcccaggcggtggagtacgagagcgccgacccgggaggcggccagggc
gaagagtccgcgtaccaggactccttcgagttcgtcgccttcctgggcgacacgacgtct
gcgccgtccacgttccgcctcaccgtctacccggacaacttctgggagccgctccacgtg
ctccgcaacggcaccctcttcgtcgaccaaggaggcagcgctgtcctggacgcttcgatg
ctcctggtcacccaccctgccctcgatgccgccaacatcagcttcagcgttacgcagcca
ctcttgtcgggcagactcctggtcgaagaccgcgtcgttggaagcttctcccaggccgac
ctcgactctggcgtggtccgctttcagcactctggcaaccttagtcaagaccgcgtcgtc
ctggaagtctccaacggcattgcttcgcggatccagctggaactaccggtgcgcgtggtg
ccccaggccattctgctggacaccggcaacgtcagcgtgaccgagggcggacaggcggcg
ctggactcctcccatatcagcgccggtccgcttcgggagttgctgccacagctcttggtg
gtggagcccccgcagcatggacgcctctcggcttcggccttctctccagaagccctcgac
cgcggcgagctccggtatcgccacgacggcagcgagacgtctcgagactggttcacggtc
gtggctcgaggccccggccgcgagagcctgccgggcaccgtccacgtctcggtggagcct
gtcaacgacgaggcgccgtacatggccaacaacacgggcctggacctgtgggagggtgcc
gtgtcgcccatctcgtccacgcacctggccgccgtggacgaagactcggagccggcccag
ctccgcttccacatttcgacgcccagcaacggctacgtggcactccggaacgataccaag
gttcctctgctctcgttcacccaggatcagatcaacaggggcctcgtggtttttgttcat
actggtgcgtgttcaccagcaggaggattcaagttccaggtgaccgatggtctcaaccag
ggctccccgcacgtcttcacggtgaacgcgcgaccgctcaagattcgcttggagcacaac
aagacgctcagcgtgcttccgggaagccagcagtctatcaccagggatcatctcctggca
cgtactggtgaccgcaaccgagacgtgtcctttgttgtcgtccaacagccccgattaggt
atcctgctgcgcgagaatccgcaagacggaactctggtccaactcagccgcttcacgcaa
gccgatctggacaactacttggtcctctacgagcatcgtgcacccatgtctcagcccgtg
gaacacgactccctccagcttgacctggtgacggccaatgcggcgcccgtgacgggtgtt
ctcttcggcatccggatcgctctgggggactccgtggcctcgctcctcgggacacttcag
gtcaccgagggcggaagaacgcctttggcatccgcgttggatgtggcgggtcttcaggca
ctctggcgcggcaagccagacgttccaccccgccttcgactctgtgtgctctcagcgccg
attcgtggctggcttgagctggaccagcggaacgtaactgtccccctgtgcgtcgcggcc
caccgcttagatcagctcatctacgtccacgacgattcggagacgctcgaagactccatt
cgcgtcgggctcttccttgcctcagccaatggcgaccgtccggacttagccctacacaac
ggaacgttacgcgtcaccgtgcatccagtcaacgatcggccgttcactgtcgagacacct
agccccgtcgtcagagttgccagagggtacaggacaacgctgtcttccagcatcctgaag
acttcagacgaggacggctcttcggctcaaattgtgtaccaggtcctccgacaagacgaa
ggtgcctctatgttcgttcttgacggcgctgatgtcgctgctgcaaacttcactcaacaa
gatgttgacggcgggcgagtgtctctggtccatgatgggtctacaatgacgtcagacact
ctgcagctcctggtaagtgacggcgtgcacccagccgtacccgtgtccctcctcatcgat
gttgagtctgtcgtgcttcgtgtctccaatggaaccggactcaggttgacacaaggggac
gcgcgagtggtcatcagtccaacgaccattggtgcgtcgacaaacggtgaccttcaagag
cttgtgtacaacgtgacgtctgagccccagcttggacaactggtcttccccgatggtgct
gttgccgatgagttcacgcacggcgatttaaagcaaggacttgttgtgtacgagcagcat
gaccttagcggcccaagggattcgtttgtggtgaccgtcagctgtaggcaggtgcctccc
gttgtgcatcgggtggaagtgaaagttgaggccctggtgagacagcgaccactggtggtg
cagacaggacgttttgcgctcgtcactgtcgaccatttggacgcatccaagctggcagcg
cgaaccaactctatgccgagatatcgtgtgactcgatccccaacactgggcctgctccta
ctctccggatccccaaacccagccctggagtttacgcacgaggacatactcaacgaaacg
ctcgtttaccacagccacgccaagggcgccacaacgtcccgcggcgatcacttcgacttc
gagctcacagcagcgggcgtccagccaggcatcggacgttttctgatccacctccaaccc
ccgtctacggtcgcttcagccaccactccttcaacccgcgacgccaacgacaacaacaac
gatactggaacggaacgacctccagggatcatcgagacaggcatccgcgtaccccttctc
accaacgaccacctcgttgtgattggagtcgcagccggcatccttcttctgctcactgtc
atcgccgtagtcggggtcgcctgcggcgcctgtcgaagccgaggcgggaccggagagaag
ccccgtgacagcaccggttcccgactgtcttcagcgagaggtcctggtatgccgctcgaa
gaaacaccgtcgccgccggctgcgccgcccacgtccccgtcgagtacgagcagcgagcca
gtgcctggcgtgccggacatggactgtctgccgccgccctacgcggggagcacagaggtc
agccccgcggtccccacgtgcaaggtaacaccgttaggtcaccccgaagccctcaaagca
ccttcggaggcggcaagtgaaagcgatgactggaacggggaggttcgcttctcggcgccc
accaccgtgctcaggaagaaccagtactgggtgtga
DBGET
integrated database retrieval system
