Ixodes scapularis (black-legged tick): 8043042
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Entry
8043042 CDS
T01131
Name
(RefSeq) collagen alpha-3(IX) chain
Organism
isc
Ixodes scapularis (black-legged tick)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
8043042
NCBI-ProteinID:
XP_040065159
EnsemblRapid:
LOC8043042
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MSSPRSRAIFPLGLPEEFSFVTTFRKRNTRRDPWFLVRVTDVAGSPQFGLSVDGRKNRLE
LYAQDVAGKRQVLRFMNVRVDDREWHKVDLSVFRDHVVLYLDCEKHSSLELTTPRAPIDV
NGDVNLAKFEADLSTVPLDLQWMVMSCNPSRPERESCIELPPKKVPTVPPTLPAPSPPPV
PIESVCVDCPPGPPGLNGTEGVPGLPGADGKPGIPGVPGMKGELGNPGVPGLPGLDGLPG
LPGPTGPVGSKGSTGAPGIPGAPGLKGQKGDNGVPGEPGVPGSPGTMGPRGPQGLPGTAI
VTEGSIGPPGEVGPPGPMGEQGLQGLPGPVGPPGSKGEPGERGVTGKTGPRGLTGEPGPR
GLQGEQGIRGPAGPPGRDGIPGTTSETSTSPGVPGLPGIPGETGPQGPPGEKGSRGPPGI
QGIEGEKGVKGDRGITGLPGPTGPKGDRGERGYQGDSGPKGDRGPSGVDGSRGEPGLIGL
PGPTGKDGSSGLSGQKGEKGEQGEVGKPGDVAYPGEQGPPGVAGPKGEPGADGRMGIMGP
LGPRGFPGPPGLPGPPGKAGVRGEQGAEGTHGDKGLRGPEGQRGLPGPQGPPGIAGTPGH
PGLPGLMGPMGPKGTEGSRGLPGEKGECVYQTKEEYHVGHSRTGATGAMGPPGLPGERGA
RGDRGPPGSPGQLGMPGPLGSPGVPGTPGTRGQPGMPGLPGPPGRGFTEEEMREVCSTVL
REQLAELTAKLRGPAGLPGRGKPGRAGPPGPQGSPGDPGTPGLPGERGFMGLPGLPGPQG
QSGPTGEKGDKGDRGPEGIGMEGPIGPHGSPGSPGPSGIGVPGRPGERGPPGRLGAPGPR
GPPGVQGPPGYCEMCNYASADILNMLHMNTVRENNKGPGK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccctcgttccagggccatcttccctctgggcctgcccgaagagttctctttc
gtgaccacgttccgcaagcgaaacacccggagggacccctggttcctggtgcgcgtcacg
gacgtggccggctcgccgcagttcggcctcagcgtggacggacgcaagaacaggctcgaa
ctctacgcccaggacgtggccggcaagaggcaggtcttgcgcttcatgaacgtcagggtg
gacgaccgcgaatggcacaaggtggacctgagcgtgttccgtgaccacgtggtgctgtac
ctggactgcgagaagcactccagcctcgagctcaccacgcctcgggctccgatcgacgtg
aatggcgatgtcaacctggccaagttcgaagcagacctcagcaccgtgccgttggatctc
cagtggatggtgatgagctgcaatccatccagaccggaaagggaatcgtgcatcgagctt
ccgcccaaaaaggtacccacggtgccgcctacgctgcctgccccttcccctccgccagtg
ccgatagagtcggtgtgcgtggactgccctcctggacctcctggactaaacggaacagag
ggagttccaggcctcccaggagcagacggaaaacctggaattccgggagtgccggggatg
aagggagaacttggcaatcccggggtaccgggactaccgggactggacggactaccagga
ctgccgggaccaaccggacctgtgggatctaaaggatcgactggagcccccggaatacca
ggagcaccgggcttgaagggtcagaagggagacaacggagttcctggcgaacctggcgta
ccggggagtcctggtacgatggggcccaggggaccgcaaggacttcctggaaccgctatt
gtgaccgaaggttccataggacctcccggagaagtcggaccaccggggcccatgggtgaa
cagggcctgcaggggctacctggaccagtgggtcccccaggaagcaagggcgaacccggc
gaaagaggagtcacggggaagacgggcccccgtggtcttacgggagagcctggtccaaga
ggactgcaaggagagcaaggcatacgaggtcctgcaggtcctcctgggcgcgatggtatt
ccaggaaccacctcagaaacgtctacatctcccggcgtaccgggacttccgggaatacca
ggagagaccggacctcaaggtcctcccggagaaaaggggagtcgaggaccgccgggcatt
caaggaattgaaggagaaaagggagttaaaggcgaccgcggcatcactggacttcccgga
ccaactggaccgaagggagaccgaggagagagagggtaccaaggtgactcggggccaaag
ggtgacaggggcccctccggagttgatggtagcagaggtgaacccggactcatcggcctc
cctggtcccaccggcaaagacggatcgtcaggattgtcgggccagaagggtgaaaaaggc
gagcagggagaggtcggcaaaccaggagacgtggcctacccaggagaacagggtccgcca
ggcgtcgctggtcctaaaggagagcctggagctgacggtcggatgggtatcatgggacct
ctgggtcccagaggattccccggacctccaggactgcctggacccccagggaaagcagga
gtacggggagagcaaggcgccgagggcacccacggtgacaaaggacttagaggccctgaa
ggtcaaagaggactaccagggccccagggccctcctggaatcgccggcactccaggacat
ccagggttaccaggtctgatgggacccatgggtcctaagggaaccgagggatctcgcggc
ctgccaggcgaaaagggagaatgtgtttaccagacaaaggaggagtaccacgtgggtcat
agcagaacaggagcgactggagctatgggaccccccggactgcccggggagaggggggcc
cgcggggacaggggaccaccaggatctccaggacaactgggcatgccaggtcccttgggg
tctcccggcgtaccagggacacccggtaccagaggacaaccaggcatgccaggactgcca
gggccaccgggtcgtggttttaccgaagaggagatgcgagaagtgtgctccaccgtgctc
cgtgaacaactggccgagctgacggccaagcttcgcggccctgccggtctcccaggaaga
ggaaagccggggagggctggaccaccggggccccagggctcaccaggggaccccggaaca
ccaggacttcctggagaacgaggtttcatgggacttccaggactgcctggaccacaggga
cagtccggaccaactggtgaaaagggtgacaaaggtgatcgtggccccgagggaatcgga
atggaaggacccataggacctcatggatccccgggatctccggggccgtccggaatcggc
gtgcccggacgacccggggagcggggtcctccagggaggcttggggctccgggacctcgc
ggacctccgggagtgcagggcccgccgggctactgcgagatgtgcaactacgccagcgcc
gacatcctcaacatgctgcacatgaacaccgtccgggagaacaacaaggggcccgggaag
tga
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