Ixodes scapularis (black-legged tick): 8043085
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Entry
8043085 CDS
T01131
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
8043085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
isc03041
]
8043085
Spliceosome [BR:
isc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
8043085
Complex C
U5 SnRNP specific factors
8043085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
NBCH_WD40
Nbas_N
Nup160
nos_propeller
Motif
Other DBs
NCBI-GeneID:
8043085
NCBI-ProteinID:
XP_042143250
EnsemblRapid:
LOC8043085
LinkDB
All DBs
Position
Unknown
AA seq
351 aa
AA seq
DB search
MAYFASQEKRKAEESALVHVKKPRNELLGYSDAGKRLQLAEVGRTSSLEAPIMLLTGHLG
ELYCGKFHPDGTYLATSGFDRQIFFWNTLGECENFAVLSGHTGAVLDMHFSTDGGLLFTA
STDKTLGVWDTRVGVRIKRLRGHSLYVNCCHPARRGPQLLCSGGDDSTLKLWDTRKRTPA
HSFQESYQITAVSFNDTAEQVLSGGIDNLIKVWDLRKNAVLYRMAGHLDTVTGMSLSPDG
SYLLSNSMDNTLRIWDVRPFAPQERCVKILQGHQHNFEKNLLRCGWSPDGAQVVAGSADR
CVHVWDTTSRRLLYKLPGHKGSVNEVSFHPKEPIVLSVSSDKQVFLGEIDK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcctatttcgcgtcccaagagaagcggaaagccgaggagtccgccctggttcacgtg
aagaagcctcgcaatgagctgctcggctactccgacgcgggaaagcggctccagttggcc
gaggtgggtcgcacgtccagcctggaggcccccatcatgctgctcacgggccacctgggg
gagctctactgcggcaagttccacccggacgggacgtacttggcgacctcgggcttcgac
cgccagattttcttctggaacaccctgggagagtgcgagaactttgccgtgctgagcgga
cacacaggtgccgtgctggacatgcacttctccacggacggcgggctgctgttcacggcc
tcgacggacaagacgctgggcgtgtgggacacccgggtgggggtgcgcatcaaacgactg
cggggccactccctctacgtcaactgctgccacccagcccgcagggggccccagctgctc
tgcagcgggggcgacgacagcaccctcaagctctgggacacgcgcaagcggacgcccgcg
cacagcttccaggagagttaccagatcacggcggtgtccttcaacgacacggctgagcag
gtgctctcggggggcatcgacaaccttatcaaggtctgggacctgcgcaagaatgccgtg
ctgtaccgcatggccgggcacctggacactgtgacggggatgtcgctgagtccggacggc
tcctacctgctctccaactctatggacaacaccctgcgaatctgggacgtgcggcccttt
gcaccccaggagaggtgcgtcaagatcctccaaggtcaccagcacaactttgagaagaac
ctgctgcggtgcggctggtcgccggacggagcccaggtggtggcggggtcggcggaccgg
tgcgtgcacgtgtgggacacgacgagccgacgcctgctctacaagctgcccgggcacaag
ggctccgtcaacgaggtctccttccatccaaaggagcccatcgtgctatcggtgtccagc
gacaaacaagtgttcctcggcgagatcgacaagtga
DBGET
integrated database retrieval system
