Ipomoea triloba (trilobed morning glory): 116002480
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Entry
116002480 CDS
T07384
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
itr03036
]
116002480
Chromosome and associated proteins [BR:
itr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116002480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
116002480
NCBI-ProteinID:
XP_031098489
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Position
13:10517790..10529151
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AA seq
792 aa
AA seq
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MEDDNGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLEFYEPM
VIIVPPNKLAADGMVGVSQLADRFFSTIRKVIMARGCFDDTRGAVLIKNLAAKEPSALGL
DSYYKQYYLCLAAAAATIKWTEAEKGVIVTNHSLLVTFNGSFDHMNIDSSSVQNLEIIEP
MHSGLLGTSNKKRSLFQMLKTTRTFGGTRLLRANILQPLKDIETINARLDCLDELMSNEQ
LFFGLSQALRKFPKEIDRVLCHFCFKPKKVTNEVLATDNARRSQNLISSIILLKTALDAL
PLLSNVLKDAKSFLLRNVYESTCENEKYASIRKRIGEVIDEDVLHTRVPFVARTQQCFAV
KAGVDGLLDMARRSFCDTSEAIHSLAIKYREDFKLPNLKIPFNNRQGFYFSIPQKSIQGK
LPNKFIQVIKHGNNIHCSSLELASLNVRNKSASKECYIRTELCLEALMDAIRQDVSVLTL
LSEVLCLLDMIVNSFAHMISTKPVDQYTRPQFTYDGPLAIDSGRHPILESIHNDFIPNNI
FLSEASNVVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPARYATLRVIDRIFTRMGTID
CLESNSSTFMTEMKETAFIMQNISKRSLVVMDELGRATSSSDGFAMAWSCCEHLLALKAY
TIFATHMENLSELAIIYPNVKILHFYVEVKNNRMDFKFQLRDGQLHVPHYGLMLAGVAGL
PSSVVETAKRITSTITQKKTKRLEVNCQQYRDIQMIYRVSQRLICLKYSNQDEDSLRESL
QNLKESYISGNI
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgacaatggagagagatcaagcttcgttatcggcctcattgagaatcgcgcc
aaggaggttggagtagctgcttttgacttaagatcagcttcactgcatctttctcagtac
attgagactagcagttcctatcagaatacaaagacactgctagagttctatgaacctatg
gtaatcattgttcccccgaataaattggccgctgatggtatggttggagtctcccaacta
gctgacagatttttttccacaataaggaaggtcataatggcacgtggctgctttgatgat
accaggggagctgtgctgataaaaaacttagctgccaaagaaccatctgcgcttggttta
gactcgtattacaaacaatactatctatgcttggctgctgcagcagcaaccattaagtgg
acagaagcagagaaaggggtcattgttacaaatcactcattgctggtcacctttaacgga
tcatttgaccacatgaatattgattcttctagtgtccagaacttggagataatagagcca
atgcactctggccttttggggacaagcaacaagaagagaagcctattccaaatgcttaag
acaaccagaacttttggagggactagacttcttcgagcaaatattttgcagccattgaaa
gacattgaaactattaatgctcgacttgactgcctggatgagttgatgagcaatgagcag
ctgttttttggcttgtctcaagctcttcgtaagtttcccaaggaaatagatagagtcctt
tgccacttctgcttcaagccaaaaaaagtcacaaatgaagtcttggccactgataatgca
cgaaggagccaaaatttgatatcaagtattattcttctcaaaacagctctggatgccttg
ccgctactctccaatgtgcttaaagatgccaagagttttttgctcagaaatgtttacgag
tccacatgtgaaaatgagaaatatgcctccataaggaaaagaattggggaggtgattgat
gaagatgtgcttcatactcgggttccctttgttgctcggacacagcagtgctttgctgta
aaggctggagttgatggacttcttgacatggcacgaagatcgttttgtgataccagcgaa
gcaattcacagccttgcaattaagtaccgtgaagattttaaactaccaaatttgaaaatc
ccattcaataacaggcaagggttttactttagcattccacaaaagagcatacaaggaaaa
cttcccaacaagttcatccaggttataaagcacggtaacaacatacattgttctagtctg
gagcttgcttcattgaatgtgcggaacaagtctgcaagtaaggaatgttatataaggact
gaactttgcttggaagcgctaatggatgctatacgacaggatgtttctgtgcttacactt
ctttctgaagtcctatgccttctagacatgatagttaactcatttgctcatatgatttca
acaaaacctgttgatcaatatactagacctcaatttacttatgatggtccattagcaatt
gattctggaaggcaccccattctagaaagcattcacaatgatttcattcccaacaatatc
tttctctctgaagcatcaaatgtggtaattgtgatgggacctaacatgagtgggaaaagt
acttatcttcaacaagtatgtcttattgtcattcttgctcaaattgggtgttacattcct
gcccgctatgccactttgagggtgattgatcgaattttcacaaggatgggaactattgac
tgccttgaatctaactctagcacgttcatgacagagatgaaagagacagcttttataatg
caaaacatctccaaaagaagtcttgttgtgatggatgagttggggagggcaacttcttca
tctgatggatttgcaatggcttggagctgttgtgaacatctattggcactgaaagcgtat
actatatttgctacccatatggaaaatctgtcagagcttgccatcatctacccgaatgtg
aaaattcttcatttttatgttgaagtgaaaaacaaccggatggatttcaagtttcaactg
agagatggacaacttcacgtgccacattatggccttatgctagcaggtgtggctggtttg
ccaagttcagtggttgaaacagccaaaagaattacatcaacgattactcaaaagaaaaca
aagagactagaggtgaattgccagcaataccgtgacattcaaatgatctaccgtgtttct
caacgtctgatatgcttgaagtattctaatcaagacgaagattctctgagggaatctttg
cagaatcttaaagagagttacattagtggaaatatttag
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