Ipomoea triloba (trilobed morning glory): 116013810
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Entry
116013810 CDS
T07384
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
itr01002
]
116013810
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
itr04121
]
116013810
Enzymes [BR:
itr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116013810
Peptidases and inhibitors [BR:
itr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116013810
Ubiquitin system [BR:
itr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116013810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
COP23
Motif
Other DBs
NCBI-GeneID:
116013810
NCBI-ProteinID:
XP_031109600
LinkDB
All DBs
Position
3:complement(2039672..2045509)
Genome browser
AA seq
369 aa
AA seq
DB search
MGAAGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYSNNKT
PADADENLLTCLADLFMQISSQKKKTGVVGPKRFVQKLKKQNEIFRSYMHQDAHEFLNYL
LNELVDILEKESNAVKGDQESSSPTEKIANGPKTVLVNGAQKKPLVTWVHKNFQGILTNE
TRCLRCETVTARDETFFDLSIDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ
KRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLNNTVEDADTEYSLFAVV
VHIGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY
ERVSQGATS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggccggctcgaaactcgaaaaggcccttggagatcagttcccagaaggcgag
agatatttcggtctggagaatttcggtaatacttgctactgcaacagcgtgctacaggct
ctctatttctgtgttccatttagggagcagcttttggaatactattctaataacaaaacc
cctgctgatgctgacgaaaatcttttgacatgcttggcggacctatttatgcagattagc
tcacaaaagaaaaaaacaggcgttgttggtccaaaacgctttgtacagaagctgaagaag
cagaacgaaattttccgcagttatatgcaccaggatgctcatgaattcctgaactatttg
ctgaatgaactcgttgacatactggagaaagagtcaaatgctgtgaaaggtgatcaagaa
agttcatcgccaaccgaaaagattgcaaatggaccaaagacagtccttgtcaatggtgct
caaaagaagccactggtcacctgggttcacaaaaacttccagggtatattgacgaatgaa
acaaggtgccttcgctgtgagactgtaacagcaagggacgaaacattttttgacttgagc
attgatattgaacaaaacagttcaataacaagctgcctgaagaatttcagttctactgag
actctgaatgccgaagacaagttcttttgtgacaagtgttgcagtttgcaagaggcccaa
aagagaatgaagattaaaaagcctcctcatatcctagtaatccatttgaagcgattcaag
tatatagagcaactagggcgctataagaagttatcttaccgtgttgtcttccccctggag
ctgaagttgaacaatacagttgaggatgcagacactgaatactctttatttgcagtggtt
gtccatattggtagtggacctaaccatggacactacgtcagccttgtcaaaagtcacaac
cattggttattctttgacgacgagaatgtggagatgatcgatgaatctgctgtacagact
ttctttggatcagcccaggagtactccagcaacacagatcatggttacatcttgttctat
gaaagagtcagccagggcgccacaagctaa
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