Ipomoea triloba (trilobed morning glory): 116025119
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Entry
116025119 CDS
T07384
Name
(RefSeq) lycopene beta cyclase, chloroplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00906
Carotenoid biosynthesis
itr01100
Metabolic pathways
itr01110
Biosynthesis of secondary metabolites
Module
itr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
116025119
Enzymes [BR:
itr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
116025119
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
FAD_oxidored
Thi4
HI0933_like
Pyr_redox_3
Pyr_redox
NAD_binding_8
GIDA
Trp_halogenase
FAD_binding_2
FAD_binding_3
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
116025119
NCBI-ProteinID:
XP_031122077
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Position
1:28847860..28849788
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AA seq
494 aa
AA seq
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MDTLLKTPNELEFLHPHHGFTSLKPQKQEIRIGSWKSCRNVGRVKASSSALLELVPVTKK
ENLDFELPMFEPSKGIVVDLAVVGGGPAGLAVAQQVSQAGLSVCSIDPSPKLIWPNNYGV
WVDEFEAMDLLDCLDTTWSGAMVYIDDRTTKDLDRPYGRVNRKKLKSKMMQKCIANGVKF
HQAKVIKVIHEESKSMLICSDGVTIQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAE
VEEHPYDLNKMVFMDWRDSHLNSNLELKERNKRIPTFLYAMPFSSQRIFLEETSLVARPG
LDMKDIQERMVARLRHLGINVKSIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTG
YMVARTLAAAPVVANAIIQYLGSERSLLGNELSASVWKDLWPIERRRQREFFCFGMDILL
KLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLRELIFFGLSLFSHASNTSRLEIMTKGTL
PLVNMINNLLQDID
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgctaaagacccctaatgagcttgaatttctgcacccacatcatgggttt
acctccctgaagcctcaaaaacaggaaattaggattggttcatggaaatcttgcaggaat
gttggccgtgttaaggccagcagtagtgccctattagagcttgtgcctgtgaccaagaaa
gagaatcttgattttgagctccctatgtttgaaccctctaaagggattgttgtggatcta
gctgtggttgggggtggccctgctgggcttgcagtggcacagcaggtttcacaagctggg
ttatcagtttgttcaattgacccctctcccaaattgatttggcccaataattatggagtt
tgggtggatgaattcgaggccatggatttgttggattgcctcgataccacttggtctgga
gctatggtgtatattgatgaccgcacgactaaagatcttgacaggccttatgggcgggtt
aacaggaagaaactcaaatcgaaaatgatgcagaaatgcattgcgaatggtgttaagttt
catcaagccaaggttataaaggtgatccatgaagaatcgaaatccatgttgatttgcagt
gatggtgtgacgattcaagcaactgtggttcttgatgcaactggcttttctagatgcctg
gttcagtacgataagccttataatccgggctatcaagttgcgtatggcattctggcagaa
gtggaggaacacccttacgatttgaataagatggttttcatggattggcgagactctcac
ctaaacagtaacttggagctaaaggagagaaataaaagaatcccgacctttctttatgcc
atgccgttttcctcgcagaggatattccttgaagaaacctcgctagtggctcgtcctggc
ttggatatgaaggatattcaggaaagaatggtggctcgtttaaggcacttaggtatcaat
gtcaagagcattgaagaagacgagcgttgtgttatcccaatgggaggtcccctacccgtg
ataccccaacgagttgttggaattggcggtactgcaggtatggttcatccctcgaccgga
tatatggtggcaaggactctggctgcagctccggttgttgccaacgcaatcattcagtac
ctaggttccgagagaagccttctgggcaacgaattatcagcatctgtttggaaagacctg
tggccgatagagaggaggcggcaaagggaattcttttgttttggtatggatattctactg
aagctcgatttgccagccacgagaagattctttgatgcgttttttgatctagaaccccgt
tattggcatggatttctatcatcccgcctgtttcttcgtgagctcatattttttggtctc
tcgcttttctctcatgccagtaatacttctaggttagagataatgaccaagggcactttg
cctctggtaaacatgatcaacaatttgttacaggatatagattaa
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