Isoptericola variabilis: Isova_3013
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Entry
Isova_3013 CDS
T01520
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
iva
Isoptericola variabilis
Pathway
iva00470
D-Amino acid metabolism
iva00550
Peptidoglycan biosynthesis
iva01100
Metabolic pathways
iva01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Isova_3013
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Isova_3013
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Isova_3013
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
iva01011
]
Isova_3013
Enzymes [BR:
iva01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Isova_3013
Peptidoglycan biosynthesis and degradation proteins [BR:
iva01011
]
Precursor biosynthesis
Amino acid ligase
Isova_3013
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
ATP-grasp_3
ATP-grasp
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
AEG45691
UniProt:
F6FWQ0
LinkDB
All DBs
Position
3300425..3301390
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AA seq
321 aa
AA seq
DB search
MSDSSGRRLGPVVVLAGGLSHERDVSLRSGRRVAEALRAAGLEVQLHDVDADLLAFLRET
RTAVVWPLLHGASGEDGSIRDVLDLVGLPYVGSGPRESRAVWNKPVAKAALLAAGIDTPA
YVTLPQALFRDLGAQAVLDAVVERLGLPLVVKPVQGGSALGVTRVETAAEFPRAMVNCFA
YGDTALIERAIDGIELAVSVLDGPDGPEALPAVEIVTEGAYDYDARYNPGPVEYFAPARL
TPDQAAHVADVAVRAHRALGLRHLSRTDMILPADGPASVLEINVAPGMTETSLLPQAVAA
AGLELPVVYRQLVEHAVPVRG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactcgtcgggacgccgcctcggcccggtggtcgtgctcgccggcggcctctcg
cacgagcgtgacgtgtcgctgcgctcgggccggcgcgtcgccgaggcgctccgcgccgcg
ggtctcgaggtgcagctccacgacgtcgacgccgacctgctcgccttcctgcgcgagacg
cggaccgcggtggtctggcccctcctgcacggtgcgagcggcgaggacggttcgatccgc
gacgtcctcgacctagtcggcctcccctacgtgggaagcggcccccgcgagagccgcgcc
gtctggaacaagccggtcgcgaaggccgcgctcctggccgcaggcatcgacacacccgcc
tacgtcacccttccccaggcgctcttccgcgacctcggggcccaggctgtgctcgacgcc
gtggtcgagcgtctcgggctgccgctggtcgtcaagccggtccagggcggctccgcgctg
ggcgtgacccgcgtcgagacggccgccgagttccctcgcgccatggtcaactgcttcgcg
tacggcgacaccgcgctcatcgagcgtgcgatcgacggcatcgagcttgccgtgtcggtg
ctggacgggcccgacggtccggaggccctgcccgcggtcgagatcgtcaccgagggcgcc
tacgactacgacgcgcggtacaaccccggccccgtcgagtacttcgcgccggcgcggctc
accccggaccaggcggcgcacgtcgcggacgtggcggtccgcgcgcaccgggcgctgggc
ctgcggcacctgtcacggaccgacatgatcctcccggccgacggaccggcctcggtgctc
gagatcaacgtcgcaccggggatgacggagacgtcgctcctcccccaggccgtcgccgcc
gcggggctcgagctcccggtcgtctaccggcagcttgtcgagcacgccgtcccggtacgc
gggtag
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