Jejubacter calystegiae: FEM41_02395
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Entry
FEM41_02395 CDS
T05975
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
izh03000
]
FEM41_02395
Transcription factors [BR:
izh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FEM41_02395
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_23
TP6A_N
Motif
Other DBs
NCBI-ProteinID:
QCT18575
UniProt:
A0A4P8YDC7
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Position
complement(530317..531504)
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AA seq
395 aa
AA seq
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MQIRAFCQVVKWGSVSRAANDLFRTQSAVTRAIRDLEQSMEVTLFERHFSGMILTDYGRA
ILPRARRAIEELQAIPAILERLKPAASPGREYVEPVWLFNARRLQIFLMLWSVNHTQSVA
RLLNITQPAVSAALKMLEKGSGFTLFRRTPEGVMPTPAAQAIYPGISRALNELRLIAADI
SARRGILEGEVRIGALPLSRTRLLPGAVSQFLRDYPTIRVMTNESPFDALVSEMRAGNID
FIIGALRDCEGTDLSVEPLFEEEMLVLARVGHPLQHQPVTPEALTRARWVLPRAMTPARQ
LLEAAFREMGLPAPQPRVETGDLAMVRGLLLDSDMLAAVSASQLAVEIESGVLAPLPLTL
SGTRRAIGLTFRIGALPSPAAAALLEAIRQVAHSQ
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcagatacgtgcattctgccaggtggtgaaatggggttctgtctctcgggcagctaat
gatttatttcgtacccagtcggcagtgacccgtgccattcgcgatctggagcagagcatg
gaagtgacgctgttcgaacgtcatttcagcggtatgatcctgaccgattatggtcgggct
attctgccccgcgcccggcgtgctattgaagagttacaggccattccggccatactggaa
cggctgaagcccgcggcaagcccgggacgggaatatgtggagccggtatggttgtttaac
gcccggcgtctgcaaattttcctgatgctgtggagcgtaaatcatacccagagcgtggcc
aggctactgaacattacccaacccgcggtcagcgctgcgctgaagatgctggaaaaaggc
agcggctttacgctatttcgccgcaccccggaaggggtgatgcccacgccagccgcgcag
gctatctatccgggcattagccgggccctgaatgaactgcggcttatcgcggccgatatc
tcggcccgacgcggtattctggaaggcgaggtaagaatcggcgcgttacccctgagccgc
acccgcctgttgcccggcgccgtcagtcagtttttgcgtgactatccgaccattcgggtg
atgaccaatgagagccccttcgatgcgctggtatcggagatgcgtgccgggaatatcgat
tttattatcggcgctctgcgcgactgtgaaggaaccgatcttagcgttgaaccgctgttt
gaagaggagatgctggtcctggcacgtgtcggtcaccctttgcagcaccagcctgttact
cctgaagctctgacccgggcccggtgggtgttgccaagggcgatgacgccagctcgccaa
ttactggaagcggctttccgggagatgggattaccagcgccgcagcccagagtggagact
ggcgatttggccatggtacgcggtctgctgctggattccgatatgctggcggcggtgtca
gccagtcagctggccgtagagattgaaagcggcgtactggcgccgctaccgctgacgctt
tccggtactcgtcgcgcgattggtctgacattccggatcggagcattgccatctcctgct
gcggcagcgctgctggaagctattcgtcaggtggcccattcacagtga
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