Janthinobacterium sp. HH102: JAB4_028780
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Entry
JAB4_028780 CDS
T08624
Symbol
fecI_4
Name
(GenBank) putative RNA polymerase sigma factor FecI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jah
Janthinobacterium sp. HH102
Pathway
jah02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JAB4_028780 (fecI_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jah03021
]
JAB4_028780 (fecI_4)
Transcription machinery [BR:
jah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JAB4_028780 (fecI_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_24
MerR
HTH_11
HTH_3
HTH_17
HTH_IclR
HTH_28
AbiEi_4
GerE
Rv2175c_wHTH
TetR_C_16
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
QOU73423
UniProt:
A0A853T1H5
LinkDB
All DBs
Position
3203917..3204453
Genome browser
AA seq
178 aa
AA seq
DB search
MSPDPLLSAFSFPPNDAALAASLFTGHQGWLLQRLLLRLRNRAEAEDVVSETFVRVLHAG
RLSAIREPRAYLTTVAKSILLQQWRRRDIEQAYLETLALLPDAVQPSPEERAVLLEALER
LSRALETLSAKARSAFLMSQLDGLTYAQIAARLGVSASMVRQYMAQGLRCCLAVADAA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccggatccgctcttgtctgccttttcttttcccccgaatgacgccgccttggcc
gccagcctctttacgggccaccagggctggctgctgcagcgcttgctgttgcgcttgcgt
aatcgggcggaagccgaggatgtggtgtcggaaacctttgtgcgcgtgctgcatgcggga
agattgtccgccatccgcgagccgcgcgcctacctgacgacggtagcgaaaagcatcttg
ctgcagcagtggcggcggcgcgatatcgagcaggcgtatctggagaccctggcgctgctg
cccgatgccgtccagccgtcgccggaggaacgcgccgtgctgctcgaagcgctggaacgc
ctgtcgcgcgcgctcgagaccctgtccgccaaggcccgcagcgcttttctgatgagtcag
ctcgacggcttgacgtatgcgcagatcgccgcccgcctgggcgtgtcggccagcatggtg
cgccagtacatggcgcagggcttgcgctgctgcctggcggtggcggacgcggcatga
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