Jannaschia sp. CCS1: Jann_2012
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Entry
Jann_2012 CDS
T00330
Name
(GenBank) transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jan03000
]
Jann_2012
Transcription factors [BR:
jan03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Jann_2012
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_15
Motif
Other DBs
NCBI-ProteinID:
ABD54929
UniProt:
Q28QT3
LinkDB
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Position
complement(2018164..2018751)
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AA seq
195 aa
AA seq
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MPRLNSFTTRQLTDRALHRFWVHGFYASSMDDLVRATGVSRHGIYTTFGGKNAMFLACLD
QYQRTVVTPAFEVVEAAGADLTSVAAYFETQIAHGEAAGLPGPGCFVANSATEVAPDDAD
VMALVHQHNDRLRQGFAAALRQTAPAFDQDKALELAEVMVIFTNGLWTRSRSVSDATVLR
RAVENFLSLLVERTR
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgccacgcctaaactcattcaccacgcgccaactgactgaccgagccttgcaccgtttc
tgggttcatgggttctatgcctcgtccatggacgacttggtcagggcgacaggggtcagc
cgtcacgggatttacacgacgtttggcggaaagaatgcgatgttcctcgcctgtcttgac
caatatcagcgaaccgtcgtgacccccgcattcgaagtcgttgaggcggcgggcgccgat
ctgaccagcgtggcggcctactttgagacgcagatcgcgcacggcgaagcggcggggctc
cccggaccggggtgtttcgtagccaattccgcaaccgaagtcgcgccagacgacgccgat
gtcatggccttggttcatcaacacaacgaccgtttgcggcagggcttcgcggcggcgctt
cggcaaaccgcacctgcattcgaccaggacaaggctctggaactggccgaggtgatggtc
atcttcaccaacggactatggaccagatcccgaagcgtcagcgacgcaactgtcctgcgc
cgcgccgtcgaaaatttcctcagtcttctcgtggaacgcacaagatga
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