Jannaschia sp. CCS1: Jann_2068
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Entry
Jann_2068 CDS
T00330
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Jann_2068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_2068
Enzymes [BR:
jan01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Jann_2068
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Jann_2068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD54985
UniProt:
Q28QM7
LinkDB
All DBs
Position
2077362..2078759
Genome browser
AA seq
465 aa
AA seq
DB search
MARGVAPAEVTWGGTDTPRGLFDEPSSVAQSGDTSVPRSFISMADSVVWHSDPSRFAWLY
AFLWRLRDAPHLMTDRGDADLARLRAMEKNVHRCQHKMKAFVRFRDIGEAETPRRSFAAW
FEPTHHTVEPTAGFFQRRFADMDWRIITPDISAIFEGGTLRFIEDQPKPGLPDDASEALW
ITYYRNIFNPARLKVQAMQSEMPKKYWKNLPEAAAIPDLIATAPARARAMAEAAPTLPPT
RMASAQEQQRAFASSWEGSDDAFLAAVKGCTRCPLHRHATQTVPGEGPAKAALMIVGEQP
GDQEDLQGRPFVGPAGHVFDQVAAEVGLDRATAYITNAVKHFKFVPRGKRRLHQRPNAGE
VAYCKWWLEAEIARVTPKLILAMGSTAALALTGSGNNLLKRCGTIEAVAGRPPVLISLHP
SYILRIKDADQRAEARQMYQRDLGRATQMVQERAGPIGLAENGPE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttggccagaggcgtcgcgcccgccgaggtgacctggggcggcactgatacgccgcgcggg
ctgtttgatgagccgtcatccgtggcgcaaagcggcgacacgagcgttccgcgcagcttc
atttccatggccgacagtgtcgtctggcacagcgatccgtcccgcttcgcgtggctctat
gcgtttttgtggcggctgcgcgacgccccgcatctgatgacagatcgcggtgacgccgac
cttgcccgtctgcgcgcgatggagaagaacgtgcaccgctgccagcacaagatgaaggct
ttcgtgcgtttccgcgacatcggtgaggcggagaccccccgccggtcctttgccgcctgg
ttcgagccgacccatcacacggtggagcccacggcgggctttttccaacgacgtttcgcc
gatatggactggcgcatcatcacgcccgacatttcagccattttcgaaggtggcacgctg
cggttcattgaggatcagcccaaaccgggcctgcccgatgacgcgagcgaggcgctgtgg
atcacgtattatcgcaacatcttcaatccggcgcgcttgaaggtgcaggcgatgcagtcc
gagatgccaaaaaagtactggaagaacctgccggaggccgctgcgatcccggatctgatc
gccaccgcgcccgcccgtgcccgcgcgatggccgaggccgcgccgaccttgccgccaacc
cgcatggcctccgcgcaggagcagcagcgcgcgtttgcatcgtcttgggagggctcggat
gatgcgtttctggcagcggtgaagggctgcacgcgctgtccgctccatcgacacgccacg
cagaccgtgcccggggaagggccggccaaggccgcgctgatgatcgtgggggagcagccg
ggcgatcaggaggatttgcagggtcgccccttcgtggggcccgcgggtcacgtgttcgat
caggtcgcggcggaggtggggttggaccgcgcaaccgcctacatcaccaacgccgtgaag
catttcaagttcgtgccacggggcaagcggcgtttgcatcagcggcccaatgcgggggag
gtcgcctattgcaaatggtggctggaggcagagattgcgcgcgtgacccccaagctgatc
ctggccatggggtccaccgcggcgcttgcattgaccgggtcgggcaacaacctgctgaaa
cggtgcgggacaattgaagccgtcgccgggcgaccacctgtcctgatctctttgcacccc
tcatacatcttgcggatcaaggatgccgatcagcgggcggaggcccggcagatgtaccag
cgtgatctcgggcgcgccacacagatggtgcaggagcgggccgggccgatcggtctcgca
gaaaacgggccggagtga
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