Janthinobacterium sp. 1_2014MBL_MicDiv: YQ44_03205
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Entry
YQ44_03205 CDS
T04539
Name
(GenBank) RNA polymerase sigma 70
KO
K03086
RNA polymerase primary sigma factor
Organism
jaz
Janthinobacterium sp. 1_2014MBL_MicDiv
Pathway
jaz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jaz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
YQ44_03205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jaz03021
]
YQ44_03205
Transcription machinery [BR:
jaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YQ44_03205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4238
GerE
Motif
Other DBs
NCBI-ProteinID:
APA66993
UniProt:
A0A1I9XTA1
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All DBs
Position
727547..729787
Genome browser
AA seq
746 aa
AA seq
DB search
MPIKKPESKAAVKPTKVTTKAEKALDRPEARVTSAPVVSQTTDAATLAAIDTSGYVLPSV
KVPGRRGRKPKEFQPENDEVAALNAVERAELKAVDKAKAKDRKAKERALLKDAFSSDTEA
SEEELERRRQKLKTLIKFGKERGFLTYAEINDHLPENIVDPEAIEGIIGTFNDMGIAVYE
HAPDAETLLLSDNVAVVTSDDEAEAAAEAALSTVDSDFGRTTDPVRMYMREMGSVELLTR
EGEIEIAKRIEDGLKDMIQAISACPVTIAEIIAAADRIANEEIKIDEIVDGLVDENEPVA
AAPVVSAPVEEDEEEGEAEEEEGEEEEEASASGAAGFSAEQLETLKRTALEKFAVISQQF
DKMRRAFEKEGYNSKPYAKAQEAISQELLGIRFTAKVVEKLCDTLRGQVDEVRHIEKQIL
DVAVNRCGMPRAHFIKVFPGNETNLDWVDGEVNAGHAYSAILGRNIPTVKELQQRLIDLQ
ARVVLPLPDLRNINRQMAAGEMKARKAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEG
NIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISR
QILQETGAEPDPATLAIKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDNNT
LAPADAALHASMRGVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIR
QIEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtgccaatcaagaaacccgaatccaaagcggctgtaaagcccactaaagttaccacgaaa
gccgaaaaggcgctcgaccggccagaagcgcgcgtgaccagcgcgcccgtggtcagccag
acgaccgacgccgccacgctggccgcgatcgatacgtccggatatgtcttgccgtcggta
aaagtgccaggccgccgcggccgcaagcctaaagaattccagccagaaaatgatgaagtc
gccgcgctgaatgccgtcgagcgggccgaactgaaggctgtcgacaaggccaaggccaag
gatcgcaaggcgaaggagcgcgcgctgctgaaggacgccttctcgtccgacacggaagcg
agcgaggaagaactcgagcgccggcgccagaaactcaagaccctgatcaagttcggcaag
gaacgcggtttcctcacctacgccgaaatcaacgatcacttgcccgaaaatatcgtcgat
ccggaagccatcgaaggcatcatcggcaccttcaacgacatgggcatcgccgtctacgag
cacgcgcccgatgcggaaacgttgttgctgtcggataacgttgccgttgtcaccagcgac
gacgaggcggaagctgccgccgaggccgcattgtcgaccgtcgattccgatttcggccgc
accaccgatcccgtgcgcatgtatatgcgcgagatgggctcggtcgagctgctgacgcgc
gaaggcgagatcgagatcgccaagcgcatcgaagatggcttgaaggacatgatccaggcc
atctcggcttgccccgtgacgatcgccgaaatcatcgccgccgccgaccgcatcgccaac
gaagagatcaagatcgacgaaatcgtcgatggcctcgtcgatgaaaacgagccggtcgcc
gctgcccctgtcgtgtccgctcccgtcgaggaagacgaggaagagggcgaggcggaagaa
gaggaaggggaagaagaggaagaagcgagcgcgtcaggcgccgccggcttctccgccgaa
cagctggaaacgctgaaacgcacggcactggagaaattcgccgtcatttctcagcaattc
gacaagatgcgccgcgccttcgaaaaagaaggctacaactcgaaaccgtacgccaaggcg
caggaagccatttcgcaagagttgctgggcatccgcttcacggccaaggtggtggaaaag
ctgtgcgacaccctgcgtggccaggtcgacgaagtgcgccatatcgagaagcagatcctc
gacgtggccgtgaaccgctgcggcatgccgcgcgcccacttcatcaaggtcttccccggc
aatgaaaccaatctcgactgggtcgatggcgaagtcaacgccggacatgcgtacagcgcc
atcctgggccgcaacattccgaccgtcaaggaactgcagcagcgcttgatcgacctgcaa
gcgcgcgtcgtgctgccgctgccggacttgcgcaacatcaaccgccagatggcggccggt
gaaatgaaggcgcgcaaggccaagcgcgaaatgacggaggccaacttgcgcctggtcatc
tcgatcgccaagaaatacacgaaccgcggcctgcaattcctcgatctgatccaggaaggc
aatatcggcctgatgaaggccgtcgacaagttcgagtaccgccgcggctacaagttctcg
acctatgcgacctggtggatccgccaggccatcacgcgctcgatcgccgaccaggcgcgc
acgatccgcattcccgtgcacatgatcgagacgatcaacaagatgaaccggatttcccgc
cagatcctgcaggaaacaggcgcggaacccgatccggccaccctggcgatcaagatggag
atgcccgaggacaagatccgcaagatcatgaaaatcgccaaggaaccgatctcgatggaa
acgccgatcggcgacgacgacgattcccacctgggcgacttcatcgaggacaacaacacg
ctggcgccggccgacgcggccctgcatgcctcgatgcgcggcgtggtcaaggacgtgctc
gattccctgacgccgcgcgaagcgaaagtgctgcgcatgcgtttcggcatcgagatgtcc
accgaccatacgctggaagaagtgggcaagcaatttgacgtgacgcgcgagcgcatccgc
cagatcgaagcgaaggcgctgcgcaagctgcgccacccatcgcgctccgacaagctgaaa
agcttcttggaaggcaactag
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