Jatropha curcas (Barbados nut): 105633054
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Entry
105633054 CDS
T03922
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105633054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jcu03019
]
105633054
Messenger RNA biogenesis [BR:
jcu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105633054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
105633054
NCBI-ProteinID:
XP_012070961
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MESDLGKLFIGGISWDTDEERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVA
ERVIMDKHMIDGRTVEAKKAVPRDDQHILNRNTSNIHGSPGPGRTKKIFVGGLASTVTDS
DFKKYFEQFGNINDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR
AVPKELSPGPNRSPLIGYNYGLSRTNNFLNAYAQGYNMSSVGGFGMRMDSRFSPLASGRS
GFPPFGNTGYGMGMNLEPGLSPNYGGGSNFGNSPGYGRLLSPYYSGNSSRYSTPIGYGVG
NARNDSVLSPTTRNVWGNGGLNTAANPASPGAFLGSGNGNFGVSFGNNGANWGGPHVSAQ
GGGSASGYTSGSMGYGSGGDSNYGLGGGGYGRNSGTVAAPTSSFAGSTGEYEGSYGDLYR
SGSVYGDSTWRSGTPELDGSGSFGYGLGNIASDVTTKSSEGYIGSYGVTSRQSNRGIAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagatcttggtaagctcttcattggtgggatttcctgggacactgatgaggaa
cgtcttaaggaatattttagcaagtatggggaagtggtggaggcagtgatcatgagagat
cgaactacaggccgtgcccgtggctttggttttgtggtttttgcggatcctgctgttgca
gagagggtcattatggacaagcacatgattgatggacgcacagttgaagcaaagaaggct
gttcctagggatgatcagcacattttgaatagaaacactagcaacattcatggttctcca
ggccctggacgcaccaaaaagatttttgttggaggtttggcttccacagttacagacagt
gactttaagaagtacttcgagcagtttggcaatattaatgatgttgttgtgatgtatgat
cacaacacacagaggccaagaggctttggcttcattacttatgattcagaggatgcagtg
gacagagttctacataagacctttcacgaactgaatggtaaaatggttgaggtaaagagg
gcagtcccaaaggagttatccccaggacctaatcggagccccctgattggatataactat
ggtttaagtaggaccaacaacttccttaatgcatatgctcagggatataatatgagctca
gttggtggttttggaatgagaatggatagtaggtttagtcctcttgccagtggtcgaagt
gggtttcctccatttggtaatacaggttatggaatgggtatgaatttagagccagggttg
agtccaaactatggtgggggctctaactttggcaatagtccgggttatgggcggttgtta
agcccctattacagcgggaattcaagcaggtatagtactccaataggttatggcgtgggg
aatgcaaggaacgattctgttttaagcccaactactcggaatgtatggggaaacgggggc
cttaatactgctgctaatcctgccagccctggtgctttcttgggttctggaaatggaaat
tttggagtttcatttggaaataatggagccaactggggtggtcctcatgtttcagctcaa
ggtggagggagtgcttctggttataccagtgggagcatgggctatggcagtggtggtgat
agcaactatgggttgggagggggagggtatggaagaaacagtggcactgttgcagcacca
acttcatcatttgctggatcaactggtgagtatgaagggtcctatggggacttgtaccgg
agtggttcagtttatggtgattcaacttggcggtctggcactcctgaactagatggttct
gggtcatttggttatgggcttggcaatatagcttcagatgttactactaagagttctgag
ggttatattggaagttatggtgttaccagtaggcaatctaatagaggaattgctgcctag
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