Jatropha curcas (Barbados nut): 105638977
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Entry
105638977 CDS
T03922
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03030
DNA replication
jcu03410
Base excision repair
jcu03420
Nucleotide excision repair
jcu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105638977
03410 Base excision repair
105638977
03420 Nucleotide excision repair
105638977
03430 Mismatch repair
105638977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jcu03032
]
105638977
03036 Chromosome and associated proteins [BR:
jcu03036
]
105638977
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105638977
DNA replication proteins [BR:
jcu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105638977
DNA Replication Termination Factors
ELG1-RFC complex
105638977
Chromosome and associated proteins [BR:
jcu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105638977
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105638977
Check point factors
HRAD17(Rad24)-RFC complex
105638977
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
AAA_assoc_2
AAA_22
AAA_5
DUF815
AAA_11
AAA_14
AAA_24
RuvB_N
AAA_30
AAA_7
ATPase_2
bpMoxR
ResIII
AAA_25
AAA_19
AAA_18
AAA_3
nSTAND3
DNA_pol3_delta
SLFN-g3_helicase
TniB
AAA_28
TIP49
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
105638977
NCBI-ProteinID:
XP_012078293
UniProt:
A0A067KKP6
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MNEKESFMDIDGDENEDQKQNDSYETNKGKNVVVAGTPPDIKAVPWVEKYRPQSLADVAA
HRDIVDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRG
IGVVRQQIQDFASTQSFSFSAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFTLI
CNHVNKIIPALQSRCTRFRFAPLDPIHVSERLKHVIKSEGLDVTESGLAALVRLCNGDMR
KALNILQSTHMASEQITEEAVYLCTGNPLPRDIEQISYWLLNESFAETLKRISEIKTKKG
LALVDIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCNDKLQLGSLISSFTRARS
TLVAAAK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaagaatcttttatggacatcgacggagacgagaacgaagaccagaaacag
aacgactcgtacgaaacaaacaagggcaaaaatgtcgttgtagccggcactcctcccgat
attaaagccgttccttgggtggagaagtatcggcctcagtcacttgcggatgtcgctgct
catcgcgacattgttgataccatcgataggctcaccagtgaaaatagactgccccatctc
ctgctatatggtcctcctggcactggaaaaacttcgactattcttgctgtggcgcgtaaa
ctgtatggagcacagtaccacaatatgattttggagctgaatgcatcagatgacagggga
attggtgtggtgcgacagcagatacaagattttgctagcactcagagcttctctttcagt
gcaaagtcatctgtaaagttggtcttactagatgaggcagatgccatgacaaaggatgca
caatttgccttgcgtagagtgattgagaaatacacgaagaacactcgatttacccttatc
tgtaatcatgtgaacaagattattccagcactacagtctagatgtactcggtttcgattt
gctcctcttgatccaatacatgtttctgaacgactaaaacatgttataaaatctgaaggg
cttgatgttactgagagtggcttagcagcacttgtgcgactttgcaatggcgatatgagg
aaggctttgaacatattgcagtcaacacacatggcttctgagcaaatcacggaagaagct
gtatacctgtgcactggaaatccattgcccagagacattgagcaaatatcttactggctt
ctaaatgaatcatttgctgaaactttaaaacgaatttctgaaatcaagacaaagaaagga
ttggcattagtagatattgtgagagaagtgactatgttcgtttttaagattaagatgcca
tcagatgtcagagttcagttaattaatgacatggctgacatagagtacaggttgagtttc
gggtgcaatgataagttgcaacttggatcgctaatttcttcatttacacgggctcgatct
acactggttgctgcagcaaagtag
DBGET
integrated database retrieval system