Jatropha curcas (Barbados nut): 105643525
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Entry
105643525 CDS
T03922
Name
(RefSeq) bromodomain and WD repeat-containing protein 3
KO
K11797
PH-interacting protein
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
jcu04121
]
105643525
Ubiquitin system [BR:
jcu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
105643525
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Bromodomain
NBCH_WD40
Auxin_resp
Agenet
Motif
Other DBs
NCBI-GeneID:
105643525
NCBI-ProteinID:
XP_012084058
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MALRKYIPSADAPSVGMKPLNFFSKVHENAQHADPETTVEPDVDVDLREVYFLIMHFLSA
GPCHRTYGQFWNELLEHQLLPRRYHAWYSRNGDENDDGLSFPLSYTKLVERYPHIEKDHL
VKLLKQLLLNAASKSQGLIGVNALNAAVVPTLMGTGSFSLLSNDRDAEKAQVNHPPLHMR
WPHMRADQVRGLGLREIGGGFSRHHRAPSVRAACYTIAKPSTMVQKMQNIKRLRGHRNAV
YCAIFDRSGRYVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNALVASASND
CIIRVWRLPDGLPISILRGHTGAVTAIAFSPRPGSVYQLLSSSDDGTCRIWDARYSNFSP
RIYIPRPSDSLAGKNSGLSSSSGLQSHQIFCCAFNANGTVFVTGSSDNLARVWNACKPNS
DDSDQPNHEIDVLSGHENDVNYVQFSGCAVAPRFSLTDSSKEENAPKFRNSWFSHDNIVT
CSRDGSAIIWIPRPRRSHGKVGRWTRHYHLKVPPPPMPPQPPRGGPRQRILPTPRGVNMI
VWSLDNRFVLAAIMDCRICVWNAADGSIVHSLTGHTNSTYVLDVHPFNPRIAMSAGYDGR
TIVWDIWEGTPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQQDAKYD
QFFLGDYRPLMQDTYGNIIDQETQLVPYRRNMQDLLCDSGMNPYPEPYQSMYQKRRLGAL
NMEWKPPSIKLTVVPDFSLDPDFQMLPLADLDVLVEPLPEFVDAMDWEPENEVQSEDSDS
EYNVPEEYSTGGEQGSLNSSSSVDRECSAEDSEVEGRNGFHRSKRKKSKAEIEIMTSSGR
RVKRRNLDECDGNTLRTNRTRKSRIGCKASKRKSSTSKGFRPQRAAARNALTLFSKITGA
ATDGEDEDSSEADSSESESSLQNSDIQSDESEKSLQNERNKHLKGKEVPLEDNEDFVKSH
EQSHLNAGNRGKLVLKLPVRNSNKFVVSETKTTNHQIDVGPSSCKAPTEASNVNRVHIRS
VDLERSSSYTNGTAVKAKERGQTDSYMSEGYRNEDIKWGGVKARTSKRQRFGEAMSSAAY
ARFGLCFSDRRERESNLNGHVKSQNTCGTSSSAEVQDYAADNTNEVGATGREDTAADTSD
VVNTMTNGKEHLNFNECMDSDELPMVGHTANGNDSSLEFKESNIPISTKLRIKSRMISRE
SSENQGNEGSCILPASLAENTDTPVLEVPKNERTNRTTPVNEGDEFQEPNAQVDKISMPL
LNDTIGSNTHPKKMFNVVYRRSKLSKDRANSEGDSGTREGVSHASADEQYTGCILHEDIT
DGPHRTDITGSKATTDDLMNCNIKLGQEHDSDDVCRNADNGSISSRCQLPSEEWGSSSRM
TVGLRSSRNRRTSYHFRDASPVDRRKANQSGKKVSWLMLSKHEEGSRYIPQQGDEVVYFR
QGHQEYIDYIGSRETGPWKSVKGHIRAVEFCKLEALEYSTLPGSGDSCCKMTLKFVDSTS
DVCQKSFKLTLPEVTGFPDFLVERTRFDAAMRRNWTCRDKCRVYWKNDGEGDGSWWEGRI
LSVKAKTSEFPDSPWERYTIQYRSDPRETHQHSPWELFDFDSQWEQPHIDDEIRNKLISA
FAKLEQSGNTEQDRYGIQKLRQVSQKTNFTNRYPVPLSLEVIQSRLENYYYRTLEAVKHD
IEVMLTNSESYFIKNLELSGKMKRLSGWFKKTLSSL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggctctccggaagtatattccttcagctgatgcaccttctgttggtatgaagcctttg
aatttttttagtaaggtgcatgagaatgctcaacatgcagatccagagacaacagtggag
cctgatgtggatgttgacctcagagaagtttatttcttaattatgcatttcctttcagct
ggaccatgtcatagaacatatggacaattttggaatgaacttctcgaacatcaactacta
cctagaagatatcatgcttggtattcaaggaatggagatgaaaatgatgatggtctatca
ttcccattaagttacactaagttggtggaaaggtacccgcacattgagaaggatcacttg
gtaaagcttttgaagcaattattacttaatgcagcctctaaatcacaaggcttgattggt
gtaaatgctctaaatgctgctgttgttcctacacttatgggaacaggatcattttcactt
ttgagcaatgatagagatgcggaaaaagcccaagtaaatcatccccctcttcatatgcga
tggcctcatatgcgcgctgaccaggtccgtggactgggtttgagagaaattgggggtggt
ttttcaagacaccatcgtgcaccatctgtccgtgcagcatgctacactattgcaaagcct
tcaactatggtgcaaaaaatgcaaaatatcaagaggctaagaggacaccggaatgctgtc
tattgtgctatttttgatcgctcagggagatatgtcattacaggttcagatgatcgcctt
gttaaaatctggtccatggaaactgcattttgcttggccagctgtcgtggacatgaaggt
gacattactgacttggctgtgagttcaaacaatgccttggtggcttctgcttcaaatgat
tgtataattcgagtgtggcgtttgccagatgggcttccaatatctattttacgtggacat
actggagctgtcactgccattgcgtttagtccaaggcctggatctgtataccagcttctt
tcatcatctgatgatggaacatgtaggatctgggatgctagatattccaacttcagtcca
cggatatatattcctaggccttcagattcattagctgggaagaacagtggtctatcctca
agtagtggtctgcagagccatcaaatattttgttgtgcatttaatgctaatggaactgtg
tttgtcactggtagctctgacaatcttgctagggtatggaatgcttgtaagccaaacagt
gatgattcggaccaacctaatcatgagatagacgtgctatccggtcatgagaatgacgtc
aactatgttcagtttagtggatgtgctgtggcacctaggttttctctcactgatagctca
aaggaagagaatgctccaaaatttagaaattcatggttttctcacgacaacatagttacc
tgctctcgagatggcagtgcaattatttggattccaagaccacgtagatcacatgggaaa
gtaggccgttggactcgacattaccacctgaaagttcctccaccaccaatgcctccccaa
cctccccgaggaggtccgcgtcaaagaattctaccaactcctcgtggtgtgaatatgatc
gtgtggagcttggataatcgttttgtcctggctgctattatggattgtagaatttgtgtt
tggaatgctgctgatggtagcatagtacattctttgaccggccacactaattctacatat
gttctggacgttcatcctttcaacccacggattgctatgagtgctggctatgatggaaga
acaatagtgtgggatatatgggagggcacacccatccggatctacgagatttcccgtttc
aagttagttgatggcaagttttcaccggatgggacatccattatactttcagatgatgtt
ggtcaattatatatattgaacacaggccaaggtgaatcccaacaagatgctaaatatgac
cagttcttccttggtgattatcggccccttatgcaagacacctacggaaacataattgac
caagaaactcagcttgtaccataccgacgaaatatgcaagatcttctttgtgactcggga
atgaatccctatccagagccttatcagagtatgtaccaaaagagacgcttaggagctctg
aatatggagtggaagccaccttctataaaactcactgtggtgcctgacttcagcttagac
ccagatttccaaatgttgccgttggcagacttggatgttctggttgagccactgcctgag
tttgtagatgcaatggattgggagccagaaaatgaagtgcaaagcgaagattcagattca
gagtacaatgtccctgaagagtattctactggaggtgagcaagggagtttgaattctagc
tcctctgttgatcgggagtgcagtgcagaagacagtgaagttgagggcaggaatggtttt
catagatctaaaaggaaaaaatcaaaggctgaaattgagataatgacttcttcaggaagg
cgtgttaagaggaggaatttggacgaatgtgatggcaatacattgagaactaaccgaact
aggaaatcaaggattggctgtaaagcttcaaaaaggaagtcttctacatcaaagggtttt
agacctcaaagagctgctgcccgcaatgctcttacattgttttcaaaaataacaggagca
gctacagatggagaagatgaagatagctcagaggccgattcatcagaaagtgaatcctca
ctgcaaaattcagatatccagagtgatgaatcagagaaatctttgcaaaatgaacggaac
aagcatttgaaagggaaagaagttccattggaagataatgaagattttgttaaatctcat
gaacaatctcatttgaatgctggaaacaggggaaaattggtcctcaaactgccagttcgg
aattcaaacaagtttgttgtgtcagagactaaaacaactaaccatcagattgatgtaggc
ccatcatcctgcaaggctccaacagaagccagcaatgtaaatagggttcatattagatca
gtagatttggaacgctcctctagttatacaaatggcaccgcagtgaaagcgaaggaaaga
ggacaaacagatagctatatgtctgaaggatatagaaatgaggatatcaaatggggaggt
gttaaggctcgaacatctaagcgtcagagatttggagaagccatgtcatcagctgcatat
gcaagatttggtttatgttttagtgatcgcagggagagagagagtaatctgaacggacat
gtaaaatctcagaatacttgtggcacatcctcttctgcagaagttcaagattacgcagca
gataacacaaatgaagtgggagcaacaggtagggaagatacggcagctgatacatctgat
gttgtgaataccatgaccaacggtaaagagcacctgaacttcaatgaatgcatggattct
gatgaattgcctatggtgggtcacactgctaatggaaatgacagctctcttgaattcaaa
gaaagcaatatacccatctcaacaaagttaaggataaaatcaaggatgatttcaagagag
tcctcagaaaatcagggaaatgaggggtcttgtatattacctgccagtcttgctgaaaac
acagatactccagttttagaagtgcctaaaaatgaaagaaccaatagaaccactccagtt
aatgaaggcgatgaatttcaggaaccaaatgctcaagttgacaaaatttccatgccctta
ttgaatgacacaattggttccaatacacatccaaaaaagatgttcaatgttgtttaccga
agatcaaagttgagtaaagatagagctaactcagaaggtgatagtggcacaagagaaggt
gtttcacatgctagtgcagacgaacaatacactggatgtatcttgcatgaagacatcact
gatggacctcatagaactgatatcacaggttcaaaggcaactacagatgatcttatgaat
tgtaatatcaagttgggacaggaacatgactctgatgatgtatgtagaaatgccgataat
ggctccataagcagcagatgtcaacttcctagtgaagaatggggatcaagctcaaggatg
acagttggattaagatcatctagaaataggagaactagttaccatttccgtgatgcaagt
ccagtagatagaagaaaggcaaatcaatcaggaaaaaaagtgtcgtggctaatgttgtcg
aagcatgaggagggttctcgttatattccccagcagggggatgaagtagtatattttaga
caggggcatcaggagtacatagactacattggatcaagggaaacaggcccttggaagtct
gttaagggacatataagggcagtggaattctgtaaacttgaagccctcgagtattccaca
ttaccaggatctggagatagttgctgcaaaatgactcttaaatttgtagattctacttct
gacgtatgccaaaaatcatttaaattaactctacctgaagtgacagggttcccagatttt
ctcgttgagagaactcggtttgatgctgctatgcgaagaaattggacatgcagggataaa
tgtagagtctattggaaaaatgacggtgaaggagatggtagttggtgggaaggccggatt
ctttctgtaaaggctaaaacttctgaatttccagacagtccatgggaaaggtatactatt
cagtacaggagtgaccccagagaaacacaccaacacagtccttgggagctttttgatttt
gattcccaatgggagcagcctcatattgatgatgagatcagaaacaagctaatatctgcc
tttgccaaactggagcagtcaggcaatacagaacaggatcgctatgggattcagaagttg
aggcaagtatcacagaagactaattttacaaacaggtaccccgttcctttgtctcttgaa
gtcatccagtcaaggttggagaactactactatcgaactttggaggcggtgaaacatgac
attgaagtcatgctaacaaattcagaatcatactttataaagaacttagagctttccggg
aaaatgaaacggttgtcaggctggtttaaaaaaacgttatcatccttgtag
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integrated database retrieval system
