Jatropha curcas (Barbados nut): 105648623
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Entry
105648623 CDS
T03922
Name
(RefSeq) structural maintenance of chromosomes protein 6B isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
jcu
Jatropha curcas (Barbados nut)
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jcu03400
]
105648623
DNA repair and recombination proteins [BR:
jcu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105648623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
SbcC_Walker_B
KASH_CCD
ATG17_like
SMC_hinge
DUF2461
AAA_13
Baculo_PEP_C
TcdB_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
105648623
NCBI-ProteinID:
XP_037492010
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MGDSRVFADYNPSTSRSRAGTVMRIRLENFMCHSNLQIELCPWVNFITGQNGSGKSAILT
ALCIAFGSRAKGTQRAATLKDFIKTGCSYAVVEVVVKNQGEDAFKPDIYGDAITIERRIN
QSTSSTVLKDFQGKKVASRKEELRELIEHFNIDVENPCVIMSQDKSREFLHSGNDKDKFK
FFFKATLLQQVNDLLQSIYEHLRSANALVDELEATIKPIEKEIAELQVKIKNMEHIEEIS
QQAQQLKKKLAWSWVYYVDKQLEEQSVKIGKLKERMPTCQAKIDWEQGKVESLRDHFTKK
KAQIALMMQKTSEVRRKQDELQNSISLATKEKLELEEKHGRAANHIQKLLKRAQSLQQEV
HDTQEQHFRNTQAEESEIEERIKELQCMVDAASATLQRLKEDERELSETVSKGMNEIRKI
NEEIDNYEKKRHDTNTSIRQLRQHKANKVTAFGGQRVIHLLQVIERYHQQFDRPPIGPIG
VHLTLVDGDAWALAVENAIGRLLNAFIVTSHNDSRLLRSCAREVRYDNLQIIIYDFSRPR
LAIPPDMLPRTNKPTTLSVLHSENHIVLNVLVDMGSAERQVLVEDYDAGRAVAFDRKIPN
LKEVFTLDGYKMFSRGSVQTVLPPNKKLRTGRLCSSYDNHIKDLEQRASNFQKEAEECRK
RKRETEANLQDLQNGLNNVKRRCSSAERDLASKKLALQDLKKSYASESSTPAVSTVDELH
QEISKLQEDIQEKEIALEIFRVRRDEAEAKARDLGLSFENLCESAKEELDAFDKAEAELM
KIEKDLQSAEAEKTHYEGIMTNKVLPDIQAAEAHYRELEETRKESCRKASIICPESDIEA
LGGWDGSSPEQLSAQLKRLNQRLQHESQRYSDSIDDLRILYQKKQRKILKKQQTYQGFRE
KLKACQEALDLRWNKFQRNSTLLKRQLTWNFNGHLGKKGISGNIKVSYEEKTLKVEVKMP
QDASSSSVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMYGKTRGKDKEAA
NGGSSLLILPIRVILPPFVQLEMLCSQFDQMTYEGFACWRTVSNSNNATKI
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattctagggttttcgccgattacaaccctagtacttcacggtccagggcaggt
accgttatgcggatccgattagagaacttcatgtgtcacagcaacctccaaatcgagctc
tgcccttgggtcaatttcattaccggtcaaaatggaagcggcaaaagtgcaatattgact
gctttatgtattgcatttggaagccgagccaaagggactcagcgggcagctaccttgaag
gattttatcaaaactggttgcagctatgctgttgttgaagtggtagtgaaaaatcaaggg
gaggacgcgtttaagccagatatctatggtgatgccataactatagaacgcaggattaat
caatcaacaagttccacagtcttaaaagatttccaaggaaaaaaagttgctagtcggaaa
gaggaacttcgggagctcattgaacattttaatattgatgttgagaatccttgtgtaatc
atgagtcaagacaaaagcagagagttcttacattctgggaatgacaaagataaattcaaa
ttttttttcaaggcaactctccttcagcaagttaatgatcttttacaaagtatttacgaa
catttaaggtctgcaaatgcacttgttgatgaattggaggctacaataaaacccatagag
aaagaaattgctgaattgcaagtgaaaataaaaaacatggagcatatagaagaaatatct
cagcaggcacaacaattaaagaagaagcttgcatggtcatgggtttattatgtagacaag
caacttgaagaacaaagtgtgaagattggaaagcttaaagaacgtatgcccacttgccaa
gctaaaattgactgggaacaaggtaaggtggagtcgctgagggaccactttacaaagaag
aaggcccaaattgcactcatgatgcaaaaaacatcagaagtgaggagaaaacaggatgaa
ttgcagaattctatttccttggcaacaaaagagaagcttgagttagaagaaaagcatggt
cgtgcagccaaccacattcagaaattgctaaaacgtgcacagtctcttcaacaagaagtc
catgatactcaggagcaacattttagaaacacacaggctgaagaatctgaaatagaggaa
aggataaaagaactacaatgtatggttgatgctgctagtgccacattacaaaggttgaag
gaagatgaacgtgagttatcagaaaccgtatccaagggaatgaatgaaatcagaaaaata
aatgaagagatagataattatgaaaagaagcgtcatgataccaatacaagcattcgccag
cttcggcaacacaaagccaacaaggtgacggcctttgggggacagagagtgattcatctt
ctgcaagttattgaaagatatcaccaacaatttgacagaccgcctataggtccaattggt
gtccacctgacattggttgatggtgatgcatgggctcttgctgttgaaaatgccattgga
aggttgctcaatgcttttattgtaacaagtcataatgattctcgacttctaagaagttgt
gctagagaagtaagatatgataaccttcaaattatcatatatgacttctcacgaccaagg
ttggccataccacctgacatgcttcccaggacaaataaacctactacactttctgttcta
cattctgaaaatcatattgtattgaatgtcttggtggatatgggtagtgctgagaggcaa
gtgcttgtagaagattatgacgcaggtcgggctgttgcttttgacagaaagatcccaaat
ctgaaggaggttttcaccttagatggatataaaatgttttcccggggttcagttcagaca
gtgcttcctccaaataagaagcttagaactggccgtctatgtagctcttatgataatcac
attaaggatcttgaacaacgtgcatcaaattttcaaaaggaagctgaagaatgcaggaaa
aggaaacgggaaactgaggcaaatcttcaggatcttcaaaatggtctaaataatgtgaag
cggagatgctcaagtgctgagcgggatctggcatccaagaaactagcactacaagatttg
aagaagtcatatgcttctgaaagtagtacaccagctgtctcaactgttgatgagcttcat
caagaaatttcaaaactccaagaggacatacaagaaaaagaaattgctctggagatattt
cgagttagaagggatgaagctgaagctaaggctagggacctgggattatcatttgagaat
ttatgcgagtcagctaaagaagaacttgatgcctttgacaaagcagaggctgagcttatg
aagatagaaaaagatctacagtctgcagaagcggagaagactcattatgaaggtataatg
actaacaaggtccttcctgatatccaagcagcagaggcacattatcgagagcttgaagag
acccggaaggagagttgtagaaaagcttcaattatatgtcctgagagtgatattgaagct
ttaggaggttgggatgggagcagcccagagcaactcagcgcccaattaaaaagattgaac
cagaggcttcagcatgagagccagcggtattctgactctatcgatgatcttagaattttg
taccagaaaaagcaacgtaaaatcttaaaaaaacaacaaacatatcaagggtttcgagaa
aagttgaaggcttgtcaggaagccctagatctgcgatggaacaagtttcagaggaacagt
actcttctaaagcgtcagttgacttggaattttaatggtcatttaggaaagaaagggatc
agtggtaacatcaaagttagttatgaagaaaaaacccttaaagtagaggtaaagatgccc
caagatgcatcaagcagctctgttcgtgacaccagaggtctttcaggcggtgagcgttct
ttttcaacattgtgctttgcattagctcttcatgagatgacagaagccccattccgagca
atggatgagtttgatgtatttatgtatggtaaaacaaggggaaaggataaagaagcagca
aatggcggctcctcgctcttgattctacccatacgagtaattcttcccccatttgtacaa
cttgaaatgctatgctctcaatttgatcagatgacatacgaaggttttgcctgctggaga
actgtatcgaacagcaacaatgcgacaaaaatttaa
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