Jeotgalibaca dankookensis: BW727_101420
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Entry
BW727_101420 CDS
T04733
Symbol
rpoN1
Name
(GenBank) RNA polymerase sigma-54 factor 1
KO
K03092
RNA polymerase sigma-54 factor
Organism
jda
Jeotgalibaca dankookensis
Pathway
jda02020
Two-component system
jda02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jda00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BW727_101420 (rpoN1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BW727_101420 (rpoN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jda03021
]
BW727_101420 (rpoN1)
Transcription machinery [BR:
jda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW727_101420 (rpoN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AQS53787
UniProt:
A0A1S6IQF4
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All DBs
Position
1445345..1446643
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AA seq
432 aa
AA seq
DB search
MEFNQQYTQKQTQKQTYVPNLVQGMEILQLNRMDLATYLNRILLGNPFIEMNINEPLTIS
AKDVSNNDVSAIIEQTSVYQISLYEFLQEQIYLLYKDTTLRQLIFWWMSQLDERGYVTKS
LSEAEMETGASQIALLDALTLLQQLDPPGIAARTLQECLMIQTDRSDFAPNIAYLVLEEH
YDDLIHKRWKKISSHYDVSLEDVKAVYEYVQGLTTAPAEAFESRSKKIPYIVPELMVELI
DSNLIVKETKYKTPLLTLNTTYFNDMKAVDDKEVSAYVTAKKQEFEQLQASLIKRKKTIL
KVGTAIIMHQQAFFINEESPLKPLQLKDLAAIYQLSESTISRAVRDTFVQTPKGIFELRS
FLSRRMQDTDQSRDDVLKIIENLIAEEDKASPLSDQKLVALLEEQRIPVSRRAIAKYRQQ
LQIPSSTKRKIR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaatcagcaatacacgcaaaaacaaactcaaaaacaaacctacgtccccaac
ttagtacaagggatggaaattttacagctgaaccgaatggatttggcaacttatttaaac
cgtatcctattaggaaacccctttattgaaatgaacattaatgaacctttaacaatctcc
gctaaagatgtgtctaataatgatgtatctgctattattgaacaaacgtctgtttaccag
atttctctttatgaatttttacaagaacagatttaccttttatataaagatactacttta
cgccagttaattttttggtggatgagtcaactagatgaacgtggctatgtgaccaaatct
ctatcagaagcggagatggaaactggtgcttctcaaatagctttgttggatgctttaact
ttattgcaacagttggatccacctggtatcgccgcacgtaccttgcaagaatgtttaatg
attcaaacagatcgttctgactttgcaccgaatatcgcttacttggttctagaagagcac
tacgatgatctcatccataagcgttggaaaaaaatatcgagccattatgatgtgtcttta
gaggatgttaaagctgtttatgagtatgttcaaggcctaacgacggcaccggctgaagct
tttgaatcgcgttccaaaaaaattccttacattgtcccagagcttatggttgaattaatt
gattctaatctcatagtcaaagaaactaaatataaaacacctttattaactttaaacacc
acttattttaacgatatgaaagccgtcgatgataaagaagtttccgcctatgttacagct
aagaaacaagaattcgagcagctacaggctagtttaatcaaacgtaaaaaaacaatttta
aaggttggaacggcaattattatgcatcagcaggctttttttatcaatgaagagagtcct
ttgaagccacttcagttaaaggatttagccgcaatttatcaactcagtgaatcgacgatt
agtcgtgctgttcgtgatacctttgtccaaacacctaaaggaatttttgaactgcgatcc
tttttgtcaaggcgtatgcaagataccgaccaatctcgcgatgatgttttgaagattatt
gaaaatttgattgcggaagaagataaagcgtcaccactttcagatcaaaaattagtagca
ttattagaagaacaaaggattcctgtctcacgtagagcgattgcgaaatatcgtcaacaa
cttcaaatcccttcgtcaaccaagcgtaaaataagatag
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