Jonesia denitrificans: Jden_0414
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Entry
Jden_0414 CDS
T00972
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
jde
Jonesia denitrificans
Pathway
jde03030
DNA replication
jde03430
Mismatch repair
jde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Jden_0414
03430 Mismatch repair
Jden_0414
03440 Homologous recombination
Jden_0414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jde03032
]
Jden_0414
03400 DNA repair and recombination proteins [BR:
jde03400
]
Jden_0414
Enzymes [BR:
jde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Jden_0414
DNA replication proteins [BR:
jde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Jden_0414
DNA repair and recombination proteins [BR:
jde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Jden_0414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
Rad17
AAA_14
AAA_19
AAA_5
AAA_30
Mg_chelatase
AAA_16
AAA_2
CIS_TMP
AAA_28
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACV08079
UniProt:
C7QZS3
LinkDB
All DBs
Position
436908..439526
Genome browser
AA seq
872 aa
AA seq
DB search
MSTALYRRYRPDTFSDMIGQEHVTGPLMQALRSNRVNHAYLFSGPRGCGKTTSARVLARI
LNCAENSPENPRDTPCGQCPSCQELARGGAGSLDVVEIDAASHGGVDDARELRERATFSP
SRDRYKIFILDEAHMVTAQGFNALLKIVEEPPPYLKFIFATTEPDKVIGTIRSRTHHYPF
KLVAPDTMLSYISQLCGQEGIAAGEGVLPLVVRAGGGSVRDTLSVLDQLIAGAQGSAISY
EHAVALLGYTPATLLDDVVDALAAHDGAALFRVIEEIINTGHEPRRFVEDLLERFRDLLI
VALSPDGARAVLSALPADQYERMNHQAQQLGAGHLTYAADTTNTALTEMSGATSPRLHLE
LLCARLLLPTASDSAAALAARIDKLERGHGPTRAAVQPTSPAADGRDNDEAPVARTARPV
AKRPDSTRTTPARPNPAPAQPAGTSAPALNPAPEPDPQVAAPVNSPTAPPAVSSAASAAA
PTATTSDDVALAAAASWAAAASLVQDSAPSTPQRAHENNARNEPQREQQPEQPVASDPAP
GAHPVPTAGVEHSVSGASLTKGAVESAWVSALDTVRQQSMPAWAMAQQHAAVHGVTGSTV
HVTFPSPGLAAGFAGRGGDALLAQALSTAVGAPVEVAVHVAGSEPAITSAPPLLAAPDVP
MHRTAPPQGPPMEQVPQHVADTPTPPETTPKTWGNDEPPTPEEPPTPDEPSAPEEPPTPE
VEPLPTNMFGAAAAALRGSSARMHNPVPVSEALAGATPTRTEVAAQSALTPEVPVTPLSV
DTPSPSTSASTTTVPTPPDASTPPWEESPRQAAERRAREEQQRLAAQPTPTYVDDEPAPD
DEDLEASALFGVPLLMKRLGATIIDEQTDNGV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgcactgtatcgacgttaccggcctgacacgttctctgacatgatcgggcag
gagcatgttactggaccactcatgcaagcgttgcggtcaaaccgtgtgaatcacgcgtac
ttgttctctggccctcgaggctgtgggaaaaccacatccgcgagggttcttgctcgtatt
ttgaactgtgcggaaaactcaccggagaaccctcgtgacactccgtgtgggcagtgcccg
tcgtgccaagagttggctcgtggcggggcaggttctctggacgtggtggagattgatgct
gcctcccacggtggtgttgacgatgcgcgtgaactgagggaacgtgccaccttcagcccg
tcacgggacaggtacaagatttttatcctcgacgaagcccacatggtgacagcacaggga
tttaatgcgctgctgaaaatcgtggaggaacccccaccgtatttgaagttcattttcgca
accactgagccggacaaggtgatcggaactatccggtcccgcacccaccattacccgttt
aaattggttgcccctgacaccatgctgagttacatctcgcagctgtgtgggcaagaagga
atcgccgcgggggagggggttctcccgttggtcgtgcgggcgggtggtggctcagtgcga
gacacactgtctgtgttggatcagttgattgccggtgcccaaggcagcgccatcagttac
gaacatgcggtcgctttgttggggtacaccccagcgacgcttcttgacgacgttgtggac
gcgctcgccgcacatgatggggcggcgctcttccgtgtcattgaggaaatcatcaacacc
ggacatgaaccacggcgttttgttgaggaccttcttgaacgattccgggacctcctgatt
gtcgcgctgtcgccagacggtgcacgggcggtgttgtcggcattgcccgccgaccagtac
gagcgaatgaaccaccaagcccagcaactaggggcaggtcatctcacctatgcagcagac
acgacgaacactgcactgacagagatgtcaggtgcgacctcgccgcgcctacaccttgaa
ctgttgtgtgcccgactcctactccccaccgcaagcgattcggcagcggcactggccgcg
cgcatcgacaaactagaacgtggccacggccctacccgcgctgctgtgcaacccacctca
cctgcagccgacggccgtgacaatgacgaggcaccggttgcgcgcacggcgcgaccggtg
gcgaaacgcccagactcgacgcggaccacccccgcgcgccccaaccccgcaccggcacaa
cctgcaggaacctccgcgcccgccctgaacccggcacctgaacccgacccgcaggtcgcg
gcaccagtaaactcgccaacggcgccccccgcggtctccagcgcggccagcgccgcagcc
ccgaccgcgaccacctctgacgatgtggcactcgcggcagcagcatcctgggcggcagct
gcgtccctggttcaggattcagcaccgtccacacctcagcgtgcacatgagaataacgcg
cgcaacgaaccacaacgagaacaacaaccggagcagccagttgcgtcagatcctgcgcct
ggcgcacatccggttcccacagccggtgtagagcacagcgtctcgggcgcgtcgctgacc
aagggagcagtggagtccgcgtgggtgtctgcgttggacacagtccgtcagcagtccatg
cccgcgtgggccatggcccaacaacacgctgccgtgcatggtgtcacagggtccaccgtg
catgtcacgtttccctctccaggtctcgctgcagggttcgcgggccgtggcggagatgct
ctccttgcccaagcgctgtccaccgcagttggcgccccagttgaggttgctgtgcatgtc
gccggaagcgaacccgcgatcacctcagcaccccccttgttggctgcccctgatgtgccc
atgcaccgcaccgccccaccccaggggccacccatggagcaagtgccacagcacgtggct
gacacaccaacacccccggaaaccaccccaaaaacctggggaaacgacgaacccccaacc
cctgaggaacctcccacgccagatgagccatcagctcctgaggaacctcccacacccgag
gtcgaaccgctgccgaccaacatgtttggtgctgctgccgcagcgctgcgtggcagcagc
gcacggatgcacaaccccgtgcccgtgagtgaggcgctcgcgggtgccacccccactcgc
actgaggtggcagcacagtccgccctcacccccgaagtccccgtgaccccactgtcagtg
gacactccgtcgccgtcaaccagcgcgtcgacaaccactgtccccactccaccggatgcg
tcgacaccaccgtgggaggaatctccacggcaggcagctgaacggcgggcacgagaggaa
caacaacgacttgctgcccaacctacccccacctatgttgatgatgaacccgcacctgac
gacgaagatttggaagcatcagcactctttggggtgccgctgttgatgaaacgtttggga
gcgaccatcattgacgaacaaacagacaacggagtgtaa
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