Jonesia denitrificans: Jden_0962
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Entry
Jden_0962 CDS
T00972
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
jde
Jonesia denitrificans
Pathway
jde00061
Fatty acid biosynthesis
jde00071
Fatty acid degradation
jde01100
Metabolic pathways
jde01212
Fatty acid metabolism
jde02024
Quorum sensing
Module
jde_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Jden_0962
00071 Fatty acid degradation
Jden_0962
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Jden_0962
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
jde01004
]
Jden_0962
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jde04147
]
Jden_0962
Enzymes [BR:
jde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Jden_0962
Lipid biosynthesis proteins [BR:
jde01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Jden_0962
Exosome [BR:
jde04147
]
Exosomal proteins
Exosomal proteins of breast milk
Jden_0962
Exosomal proteins of breast cancer cells
Jden_0962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
HK
AraC_N
Motif
Other DBs
NCBI-ProteinID:
ACV08618
UniProt:
C7R2Z6
LinkDB
All DBs
Position
complement(1015866..1017680)
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AA seq
604 aa
AA seq
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MNESSVPDRCDYPPEASINTLLADRVQRAGGKTLFERQTALASGWVPVTAQQFADQVMAT
ARGLIASGVAVGDRIAIMSRTRYEWTLLDFAAWAIGAVPVPVYETSSAKQLQWICSDAGV
NILIVENSAHLAVAQEAARDLPDLREVLVLDDDALSTLATRGANTDPHEVTQRSVAVTGG
DLATIIYTSGTTGRPKGVELTHRSFVFLTRNGIADLGHVCAPGKRTLLFMPLAHVFARFI
QVLCVTSGAVMGHTPDARNLIPDLASFRPTFLLAVPRVFEKVYNSAEQKAGPRKLKLFRW
AAKVAIQYSRASERQEGPSAILKAQHAIASALVFSKLRALLGGQAEYAISGGAPLGERLG
HFYRGIGLTILEGYGLTETCAPTTVNRPHLVKIGTVGLPFPGASVKIADDHEILIKGDHL
FRGYRNNPQATAEALKDGWFHTGDLGTLDDDGYLRITGRKKEIIVTAGGKNVAPAVLEDR
LRGHPIVSQVVVVGDQRPFIGALITLDTDMLPGWLRSHNLPPMDVTTASTDEQVLAALDR
AVTRANEAVSRAESIRKFTVLTTDFTESNGYLTPSMKVKRAQVLKDFSLTIDELYGGPVS
QNDE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaatcatcagtgcccgatcggtgcgattaccctcccgaagcgtcaatcaacacc
ttgcttgctgaccgtgtccagcgagcaggtggtaagacactcttcgaacggcaaaccgct
ctggcctccggctgggtaccagtcaccgcgcaacagttcgccgaccaagtcatggcgaca
gcgcgcggacttatcgcctcaggtgtcgcagtaggcgaccgaatcgccatcatgtctcgc
acacgttacgaatggactctccttgactttgcggcctgggctatcggggccgtgccggtt
cccgtgtatgagacatcctctgcaaaacaactgcaatggatttgctctgatgctggcgtc
aacatcctcattgtggaaaactccgcccacctggcggtcgctcaggaagcagcgcgcgat
cttcctgatctgcgtgaggttctcgtccttgatgacgacgcgttgtcaacgcttgctacc
cgtggcgcaaacacggacccgcacgaagtcacacagcgttctgtcgcggtcaccgggggc
gacctagccaccatcatttacacctccggcaccacagggcgccccaaaggtgtggaactt
actcaccgaagctttgtgttcctgacccgcaacggaattgctgacctgggacacgtgtgt
gcgccaggaaagcgcaccctcctcttcatgccgctggcacatgtctttgcccgatttatc
caggtgttgtgcgtgacctcaggtgcggtcatggggcatacacccgatgctcgaaacctc
atccctgatctcgcctcgttccgtcctaccttccttctggcggttccacgagtatttgag
aaggtgtacaactcagctgaacaaaaagcgggtccccgcaaactcaaactgtttcgctgg
gctgcgaaagtggcaatccagtattcacgagcaagtgaacgccaagaaggcccctcagca
atcctcaaagcacagcacgcgattgcatccgctcttgtattttcaaaattgcgggctttg
ttaggtgggcaagccgaatacgccatctctggtggtgcaccgttgggtgaacgactcggt
cacttctatcgcggcattggtctgacaatcctggaagggtacggcctcacagaaacatgc
gcacccacaacggtgaatcgccctcatctcgtgaaaatcgggactgtcgggctgcctttc
cccggtgcatcagtgaaaatcgcggacgaccacgagatcctaatcaaaggtgaccacctt
ttccgtggctatcggaataaccctcaggctacagctgaggccctgaaagatgggtggttc
cacaccggcgacttgggcacattagacgacgacggttaccttcggatcaccggccgcaag
aaagaaattatcgtcaccgctggagggaagaacgttgctccagcggtccttgaggaccgg
ttacgtggccaccctattgtgtcgcaagtcgttgtcgttggtgatcaacgcccattcatt
ggtgcgttgatcactctggacaccgatatgcttcctggctggctgcgatcgcacaacctg
ccccccatggacgtgacgacggcatcgacagatgaacaagtccttgctgcccttgaccgt
gccgtcacccgcgcaaacgaggcagtttctcgggctgagtccatccgaaagttcaccgtt
ctcaccacagacttcactgaatcgaacggataccttactccgtccatgaaagtaaaacgc
gctcaagtcctcaaggacttctccttaaccattgacgaactctacggtgggccggtgtcc
cagaacgacgagtaa
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