Jonesia denitrificans: Jden_1680
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Entry
Jden_1680 CDS
T00972
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
jde
Jonesia denitrificans
Pathway
jde00470
D-Amino acid metabolism
jde00550
Peptidoglycan biosynthesis
jde01100
Metabolic pathways
jde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
jde00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Jden_1680
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Jden_1680
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Jden_1680
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
jde01011
]
Jden_1680
Enzymes [BR:
jde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Jden_1680
Peptidoglycan biosynthesis and degradation proteins [BR:
jde01011
]
Precursor biosynthesis
Amino acid ligase
Jden_1680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ACV09327
UniProt:
C7QYT8
LinkDB
All DBs
Position
complement(1811396..1812565)
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AA seq
389 aa
AA seq
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MENMSTSQTRPNNLGAPHAADRVRTRVLVLFGGRSGEHPISCITAAGVLRAIDRDRFDVV
AVGITQGGKWVLASTDPDEVVTSGDDLPHVADNGTEVLLPFASGDNEVRVIRDGVLESVG
PVDVVLPLLHGPFGEDGTVQGMLELADLRYVGVGVLGSAVGMDKHYMKLVFEGHGLPVGP
YTTVFPGQWQRDPDEVRARVVALGLPVFVKPTRAGSSLGISKVSDVGDLDRAMAEALKHD
PKVIIEAGIVGREIECAVLGGHGDTPARASLPGEITMTGSAHEFYDFEAKYLDDASAQLS
CPAELDETTTATVREVAVRAFDAVGGEGLSRVDVFVQEDGAVVVNEINTMPGFTPISMYP
RMWERSGVSYTELISELIDLALERPLGLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgtccacatctcagacgcgccccaataatctgggggctccccacgcggcg
gatcgtgtccgcactcgcgttcttgtcctgtttgggggccgctccggtgagcaccctatt
tcgtgtatcactgccgcgggtgtgttgcgtgctattgaccgtgaccggtttgatgtggtt
gcggtgggcatcacccaggggggaaagtgggtgttggcgtccactgatcctgatgaggtg
gtgacctcgggtgacgatctacctcacgtggcggacaacggtaccgaggtgttgttgccc
tttgcctcgggtgacaacgaggtgcgggtcatccgcgatggtgttcttgagtcggtagga
cctgttgatgtagtgctgccgttgctgcatggcccatttggtgaagatggcacagtgcag
ggcatgttggagctcgctgacctacggtatgtgggtgtgggggtgctgggctctgctgtg
gggatggacaagcactacatgaagcttgtttttgaaggacatggccttccagtagggccg
tataccactgtgtttcccgggcagtggcagcgtgacccggatgaggttcgtgcccgggtt
gtggcgttggggttgcctgtttttgtgaagccgactcgtgcgggctcatcattggggatt
tcgaaggtctccgatgtgggtgatcttgaccgggcgatggctgaggcgctcaagcatgac
ccgaaggtgattattgaggcgggcattgtcggccgtgagattgagtgtgctgttcttggc
gggcatggggacaccccggcccgagcatcgcttccaggtgagatcacgatgactggtagc
gcccatgagttttatgactttgaggcgaagtaccttgacgatgcgtcagcccagttgagt
tgcccagctgagttggatgagaccaccactgcgaccgtgcgtgaggtggcggttcgcgct
tttgacgcggtgggcggggaagggttgtctcgcgttgacgtgtttgttcaagaagatggt
gcagtggtggtcaatgagatcaacacgatgccggggttcacgccgatttccatgtatccg
cggatgtgggagcgatcgggtgtgtcgtacaccgagttgatttcggaactcattgatctt
gcgttggagcgtccgctgggtctgcgttag
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