Janthinobacterium lividum: G3257_14580
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Entry
G3257_14580 CDS
T06723
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jlv
Janthinobacterium lividum
Pathway
jlv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G3257_14580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jlv03021
]
G3257_14580
Transcription machinery [BR:
jlv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3257_14580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_11
PMI1_PMIR1-2_C
DUF1759
HTH_24
GerE
Phage_terminase
HTH_3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QKY03357
UniProt:
A0A377QPP5
LinkDB
All DBs
Position
3269392..3269910
Genome browser
AA seq
172 aa
AA seq
DB search
MSALPFPSNDTTLAASLFTGHQGWLLQRLLLRLRNRAEAEDVTSETFLRVLHAGRLAAIR
EPRAYLTTVAKSILLQQWRRRDIEQAYIDTLAQLPDAVQPSPEERAVLLEALERLSRALD
TLSSKARSAFLMSQLDGLTYAQIAVELGVSASMVRQYMAQGLRCCLAAADAA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgccttgcctttcccttcgaatgacacgaccctggccgccagcctcttcacgggc
caccagggctggctgctgcagcgcctgctgttgcgtttgcgtaaccgggccgaggcggaa
gatgtcacttctgaaacgtttctgcgcgtattgcatgcggggcgcctggccgccatccgc
gagccgcgcgcctacctgacgacggtggcgaaaagcatcttgctgcagcagtggcggcgg
cgcgatatcgagcaggcgtacatcgacaccctggcgcagctgccggacgccgtgcagccg
tcgccggaagagcgcgccgtgctgctcgaagcgctggagcgtctgtcgcgcgcgctcgat
accttgtccagcaaggcgcgcagtgctttcctgatgagccagctcgacggcctgacgtat
gctcagatcgctgttgaactgggcgtgtcggccagcatggtgcgccagtacatggcgcaa
ggcttgcgctgctgcctggccgcggcggatgcggcatga
DBGET
integrated database retrieval system
