Juglans regia (English walnut): 108979588
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Entry
108979588 CDS
T05245
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108979588
03036 Chromosome and associated proteins [BR:
jre03036
]
108979588
Enzymes [BR:
jre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108979588
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108979588
Chromosome and associated proteins [BR:
jre03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108979588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
Motif
Other DBs
NCBI-GeneID:
108979588
NCBI-ProteinID:
XP_035540767
UniProt:
A0A6P9ED92
LinkDB
All DBs
Position
13:23371935..23377480
Genome browser
AA seq
708 aa
AA seq
DB search
MSLFVEFLRFILCCHTEHFGYGYEYDDTTSRNSHLVYKSIRRTRTTSSPDNDPLLPYSRP
SPSLYQAKVAVDSWIRNSLIIKEPYVQESSQRTNEISPNFSNSLQPPSFSYTYSPSSSDL
PPVSSIFSSVPRNPPKSSSSASSLKGPPSPTGPSSSSPKPPPTSKPVIYPTTSHAVSEER
KTGYILKKGATSLFASSISNLPPSSSSSSPVLPNPPKSSPKPSASSLKGPPPSGPSSSSP
MPPPTFKPVLCPTTTTPGNEERKQSYILENGTAPIFAIPEYIKGQIKENIVPEILKQRLS
PSTYKAYFTALLYAEEFYLEKWSDFLLKNVTLELHEAAIYKESTKYKNLNGNLKKKNKTF
VVFEIDSIPERRPFLLSRDLVYARPVGKDIEPFQGFIYRVVKSTRVLVEFGDDFHSQHYH
SRKYDISFSFNRVCLKRAHEAVETASNPSVQNFLFPEYCVSRKDNLNPPTLFRANHEVGK
NEVSAIRHISSLRGSPPYLLSGSHCVTAMDSKELSKTGIVVQEAVCEIYRSSPECLILIC
APTNSTCDVLTRSLKNVILESDMFRANAAFREMDGVPADILRSCPIKGECFTCPSLQKLR
KFRVILSTFVSSFRLHKEGIPAGHFSHIFLLDASLAMEPEAVIPLANFATDKTAVIVTGA
STRHSAWARSDIARKYGLGKSLFNRLHENRLYSGFNPMFITQLDGFQQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtttgtagaattcttgcgtttcattctttgttgccatacagaacattttggt
tatggttatgaatatgatgacactacctcgaggaacagccatttagtatataaatcaatt
cgaagaaccagaaccacatcgtcccctgataatgacccacttttaccatattcacggcct
agtccttcattatatcaagccaaagttgcagtagattcatggataagaaattcattgata
atcaaggagccatatgttcaggaatcttcccaaaggactaatgaaatttctccaaacttt
tcaaattcattacaaccaccttcattttcttatacttattctccctcttcttctgacctg
cccccagtttcttccattttctcttcagttccccgtaatcccccaaaatcttcttcatct
gcatcatcccttaaaggacctccatctccaactgggccatcttcatcttcccctaagccc
cctccaacctccaagccagtcatatatccaactacatctcatgcagtaagtgaagaaaga
aaaacgggttatatattaaaaaagggtgcaacatcattatttgcaagttctatatccaat
ctgcccccatcctcttccagttcctctccagttctccctaatcctccaaaatcttctcct
aagccatctgcatcttccctaaaagggcctcctccatctgggccatcttcatcttcccct
atgccccctccaacctttaagccagttctatgtccaactactactactcctggaaatgaa
gaaagaaaacagagttatatattggaaaatggtacagcacctatatttgcaattcctgag
tacatcaaaggtcagatcaaggagaacatcgtgcctgaaattctgaagcagcgtttgtct
ccttcaacgtacaaggcttactttactgctctgttatatgctgaggaattctacttggag
aaatggagtgatttcctcttgaagaatgtgactttggagctccatgaagcagcaatctat
aaagaatcaaccaagtacaaaaatcttaatggaaatcttaagaagaagaataaaacattt
gtagtttttgagattgattctattcctgagaggcggccattccttttatcgagggacttg
gtctatgcgcgacctgtgggtaaagatattgagccctttcagggttttatctatcgtgtg
gtgaagagcactcgcgtattagtggaattcggagacgattttcattcacaacattatcat
tccagaaaatacgacatcagcttctctttcaatagagtgtgcctaaagagggctcatgaa
gcagttgaaactgcatcaaatccttcagtccagaacttcctctttcctgaatattgtgta
tcccgaaaggacaaccttaacccacccactctgtttcgtgccaatcatgaagttggtaaa
aatgaggtctctgcaattcgtcacatttcaagccttcggggatcaccaccttatcttctc
agtggctcacactgtgtcactgcaatggattcaaaagaactatcaaaaactggaattgtt
gttcaagaagcagtatgtgaaatatatcggagctctcctgagtgtctaattcttatatgc
gcacctacaaacagcacatgtgacgtgctgaccagaagtttgaaaaatgtaattttagaa
tcggatatgtttcgagccaatgcggcatttcgagagatggatggggtacctgctgacatt
cttcgttcatgtcctataaaaggggaatgttttacttgtccttcattacaaaaacttcgg
aaattcagggtaattttgtcaactttcgttagtagctttcgattacacaaagaaggcata
cctgctggacatttcagtcacatttttctgttagatgcctcattggcaatggagccggag
gcagtgatacctttggctaatttcgctactgacaaaacagcagttatagttaccggcgca
tccacaagacattcagcttgggcccgctctgacattgcgaggaaatatggattggggaag
tcactttttaatagacttcatgaaaacaggctttatagcggattcaatcccatgttcatc
acgcagttggatgggtttcagcagtag
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