Juglans regia (English walnut): 108985067
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Entry
108985067 CDS
T05245
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
108985067
Spliceosome [BR:
jre03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108985067
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
108985067
NCBI-ProteinID:
XP_018812766
UniProt:
A0A2I4E051
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All DBs
Position
13:complement(38761051..38767999)
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AA seq
446 aa
AA seq
DB search
MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFADLNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGE
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDTETASSAKNALDGRSIPRYL
LPEHVGPCTLRITYSAHTDLSVKFQSHRSRDYTNPYLPVAPSAIDGNGQLTVGLDGKKLE
PESNVLLASIENMQYAVTLDVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAK
EALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPVVNSQPSILGQQPVSG
MGPTVQYNGAPFTTTPEQPAMPQPSAGWGPGVPPMHQSMPMQMHNNPYMPPGTMLPQVAP
GMMQSSIHSGMPQSSMLPPYGSGQMR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtatccagtcaaccgcagtttcgttacacccaacctccatccaaggtgctt
catttgcgaaacttaccatgggagtgcacagaggaggagctgattgaacttggaaagcca
tttggtaaagttgtgaacacaaagtgcaatgttggagcaaatcgaaatcaggcttttatt
gaatttgctgatttaaatcaagctattgctatgatatcatattacgcttcgtcctcagag
ccagctcaagtgcgtggcaaaactgtctacctacagtactcaaataggcaagaaatcgtg
aacaacaaaactactgccgatgttgctgggaacgtactgttggtaacaatagagggtgag
gacgcacgccttgtcagcattgatgttttacatttggttttttcagcttttggatttgtg
cataagattactaccttcgagaagacagctggatttcaggccctggtacaattttcagat
acagaaactgcctcttctgcaaagaatgccctagatggaagaagcattcctaggtatctt
cttccagagcacgtgggaccatgtacccttaggatcacatattctgcgcacacggacttg
agtgtgaaattccagagccaccgaagcagggactacactaatccttaccttcctgttgct
ccgtcagcaatagatggaaatggccagttaactgtgggtttggatgggaaaaagctagaa
ccagagagtaatgttctacttgcatctattgaaaacatgcagtatgccgtcaccttggat
gttttacacatggtgttctctgcttttgggcctgtccaaaagattgccatgtttgataag
aatgggggtgtacaggctttgatccaatatcctgatgttcagactgctgttgttgccaag
gaagccttggaaggacactgcatctatgatggaggattttgcaagcttcacatctcatat
tcacgccataccgatctcagcattaaggtcaacaatgatcggagccgagactatacaatt
cccaacaaccccgtggtgaactcccaaccctcaattctggggcaacagccggtttcggga
atgggtcctactgttcaatacaatggggccccatttactacaacgccagagcagcctgcg
atgcctcagccttcagctgggtggggtcctggtgtaccaccaatgcatcagtccatgccg
atgcagatgcataataatccttacatgccacctgggacaatgctgcctcaagttgccccg
ggaatgatgcagtcatcgatccacagtggcatgccacagtcatcaatgttgcccccttat
ggatctggtcagatgcggtag
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