Juglans regia (English walnut): 108987765
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Entry
108987765 CDS
T05245
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
jre
Juglans regia (English walnut)
Pathway
jre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108987765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jre03019
]
108987765
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108987765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
Arf
AAA_23
AAA
AAA_15
nSTAND3
AAA_7
Zeta_toxin
AAA_30
Motif
Other DBs
NCBI-GeneID:
108987765
NCBI-ProteinID:
XP_018816315
UniProt:
A0A2I4EA92
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Position
8:complement(27912152..27915560)
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AA seq
328 aa
AA seq
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MGEDETSEPTIEINGLRFTYPGIDGHPPPGSTPLIDGFSLTLRAGHRCLLVGSNGAGKTT
ILKILGGKHMVEPHMVRVLGRSAFHDTSLTSSGDLSYLGGEWRREVAFAGFEVPIQMDVS
AEKMIYGVAGIDPKRRAELIKVLDIDLSWRMHKASDGQRRRVQICMGLLKPFKVLLLDEI
TVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPSHIVYVAHGMLQIAMPMEK
VKDISKLSLMRTVESWLRREQEEKRRRRKERKACGLPEFDEHIEGSRVTGDPARAAVRVI
NNGWAAGRLHSTIAGEDNFLFSSNRVLR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggatgaaacttccgagccaacgatagagatcaacggtttgaggttcacgtac
cccggaatcgacggccaccctccgccggggtccactcctcttattgacggcttttctcta
acccttcgcgctggtcatcgctgcctccttgtaggatccaatggcgctggtaaaactaca
attctgaagatattgggtgggaagcacatggtggaaccccatatggtacgcgtacttgga
agatcggcttttcatgacacctcgttgacctcttctggtgatctcagctatcttggtggc
gagtggaggcgagaagtcgcttttgcaggatttgaggttccaatacaaatggatgtttct
gcagaaaaaatgatctatggagttgccgggattgatccgaaaagaagagctgagttgatc
aaggtactcgatattgatctatcatggaggatgcacaaagcatctgatggtcagagaaga
cgagtgcaaatttgtatgggtcttctcaagccattcaaggtccttcttcttgatgaaata
acagtcgaccttgatgtactagcaagggctgaccttctgaggtttctaagaaaggagtgt
gaagaacgaggtgccacaatcatctatgcaacacatatatttgatggtctagaggactgg
ccatctcatattgtttatgtggctcatgggatgttgcaaatagcaatgcctatggaaaaa
gttaaggacatcagtaaattgtcattaatgagaactgtcgagagttggctgaggagagaa
caagaggagaagaggagaagaaggaaagagagaaaggcatgtggtcttccagaatttgat
gaacacatagaaggtagccgtgtgactggtgatccagcccgtgctgccgttcgtgttatt
aacaatggttgggcagctggacggctgcattccaccattgctggagaagataactttctc
ttcagctcaaatagagttctgaggtaa
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