Juglans regia (English walnut): 109001667
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Entry
109001667 CDS
T05245
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109001667
Spliceosome [BR:
jre03041
]
Complex A
Other components
Complex A specific factors
109001667
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Gene cluster
GFIT
Motif
Pfam:
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
109001667
NCBI-ProteinID:
XP_018834577
UniProt:
A0A2I4FSF5
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Position
14:complement(27853036..27860691)
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AA seq
823 aa
AA seq
DB search
MSAKVDTTSAVEPHSSKMSGMSTLSAPPTSSQKVSMFAAKSGFVIPRNKLSGSLIPIIRG
GKKLGGGDASNEESTNLTQRKTKWGPDLTQDAAVKRGRALAYQTRVDQIMQQLKLGSLEV
GDTEGSPIAAEHPDHMSPSPHNNDKKSELLELEKREVIGEILKLNPSYKAPPDYKPLLKE
SSVPLPVKEHPGFNFIGLIFGPGGDNQKRLEKETGAKIQVYGTKAETGEKGEIKLSDGNE
IHGAYEELCVQISAETFEKVDAAVSIIELLVTSVSGNLTAVSTISTSVSGDNIDISRSQD
AATTSSVGTAAVDQGVLQPVAGSTQTPLQGQFQFPSPWFPSGQSSGLIPPPNPSSPIFRN
HVHLSSSPLNPSNMPSLFGPRPTPAAGPSSILQNQPVFPRPQPQTQVPWHPYMAQISPLG
HIGPLRSPLQQPNVSAPLPFTGSQPLPIRPAPITGPLMASLSQPMSGSSSVWSGAPGGGS
VSTSLGLSNMGQMVQPIRPHPQNPQPGVASMAPSNISTASLVSTITFSSRPSMPQISGAA
VNHPIAAPHFLSNPPSQVRHPAAFSASVHHTPAPVPAPNSSINPGLGALIPSPGSSTQPP
LPMQSGITNSVAPSTPNFTVIKPPTVTAPSSGNFTFQPHGPQNPVSQTVATLSSQLATQS
TSQVQPPAPQVSSFQLAAPKLNPQPVSQVFQRPSFSNLVGQPQAPVSPVPYARTPMGPPR
HPSIPNASVSPRTPLPQMGLRNFSPAPQRPGFSGPIVPRPANPVQLQQNYPARMTRPDIL
FSPNQQFSNTLSFASSKPVSNPGGQQIYDPFSPTSVSTSKAEG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaggtcgacacgacatctgctgttgagcctcacagttctaagatgtctgga
atgagcacattatctgcaccaccaaccagtagccaaaaggtctctatgttcgctgcaaaa
tctggatttgttattccaagaaacaaattgtcaggctcattaattcctatcattcgagga
ggtaaaaagctgggaggaggtgatgcgtctaatgaggaaagtaccaacctgacgcagagg
aaaacaaaatggggccccgatctgacacaggatgctgctgttaaaaggggaagagcctta
gcttatcagacacgagtggatcaaattatgcaacagctgaaattgggatctttggaggtt
ggggacactgaaggctcaccaattgcagctgagcatccagatcacatgtctccaagtcct
cacaacaatgataagaagtcagaactgttggaacttgaaaagcgggaagtaataggtgaa
atattaaaattgaatccaagttacaaagccccacctgattataaacctttgttgaaggag
tcaagtgttccactccctgtcaaagaacatcctggattcaattttattggcctcatattt
gggcctggaggtgataatcaaaagcgattagaaaaagaaactggagctaaaatacaagtt
tatggtaccaaagcggagacaggagagaagggagaaatcaaactatctgatggaaatgaa
atccatggtgcttatgaagagttatgtgttcaaatatcagccgagacatttgagaaagtt
gatgctgctgtttccatcattgaactgctggtcacctcagtatcagggaatttgacagct
gtgtccacaatctctacttccgtttctggggataatatagatatctcccgaagccaggat
gcagccaccacctccagtgttggtactgctgcagtagatcagggagtactacaaccagtg
gccggatctacacaaacgcccttgcagggtcaatttcaattccccagtccatggtttcca
tcaggccaatcttctggtctcattccccctccaaatccttcatctccaattttcagaaat
catgtccatttatcgtcatctcccttgaatccttcaaacatgccttctttgtttgggcct
cgaccaactccagctgctggacccagttcaattctccaaaaccaaccagttttcccccga
ccacagccacaaacacaagtaccatggcatccttacatggctcaaataagtcctttagga
catattggccccttgagaagtcctttacagcagcctaatgtttcagctccacttccattt
actggtagccaacccctaccaataaggccagcccctatcacagggccattaatggcttca
ctttctcaacctatgtctgggagttctagtgtatggtctggagcccctggaggtggtagt
gtttcaacatctctaggtctgagcaacatggggcagatggttcaacccatcaggcctcat
cctcaaaatccacaaccaggtgttgcatccatggctccttcaaatatatcaacagccagt
ttggtttcaactatcaccttttcatctagaccatccatgccacagatttctggtgctgct
gtgaaccatcctattgcagctccacattttttgtcaaatccaccatctcaggtaagacat
ccagctgcattttcagcttctgtacaccatacaccagcaccagtacctgcacctaattca
tctataaatccgggattgggagcactgattccttcacctggatcttccacacaaccacct
ttacctatgcaatcaggaataacaaattctgttgctccgagtacaccaaacttcactgtc
ataaaaccaccgacagtgacagctccaagttccggtaatttcacttttcaaccacatggg
ccgcagaacccagtctctcaaacagttgccacgttaagtagccaacttgcaactcagagt
acttcacaggtgcagcctcccgcacctcaggtatcatctttccagttggctgcgcccaaa
ctaaatcctcaaccagtcagtcaagtctttcagaggccatcgttcagcaatctggtaggc
cagcctcaagctcctgtatctcctgttccctatgccagaacaccaatgggtccacccaga
catccgtcaattccaaatgcaagtgtttcacctaggactccactcccacaaatgggccta
aggaacttcagtccagctccccaaaggcctggtttctctggtcctattgttcccaggccg
gcaaatcctgttcaacttcaacaaaattatccagctcgaatgactaggccagatatcctc
ttttctccaaatcagcaatttagcaacactttatcctttgcatctagtaagccagtttct
aatcctggaggacagcaaatttatgatcctttctcacctacgtctgtgtctacctcaaag
gcagaggggtga
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