Juglans regia (English walnut): 109001871
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Entry
109001871 CDS
T05245
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109001871
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109001871
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
PKMT_2nd
Motif
Other DBs
NCBI-GeneID:
109001871
NCBI-ProteinID:
XP_018834906
UniProt:
A0A2I4FTC6
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Position
10:366848..375868
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AA seq
531 aa
AA seq
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MGSTFNPQILVEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWDQRFHGSPREQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALHDVIENGDEYGRNAALRLFFLMQISIWEER
KVFGSRGQILKEGLVGGRHMENSNRNGKNLNFKLRPSAGNILEKIVSDYHAVYGGQLDED
VILSKCSNAVSSLEKLDKEIGGDINSGQFHGSAFVEELRGQHAILRDCIEQLTAVESSRA
SLVSHLREALQEQEFKLDRDRNQLQAAHSQSEQAGNICQQLLDRNKGRSPAEPSPRESQT
SMAPHSFVPGDREQSAPVMYTRQVSFPEKSGQVEDDPRKSAAAAVAAKLTASTSSAQMLS
YVLSSLASEGVVGNPVKESPSAYPHEKRHKLENDQSSYIPQNLQQKPVPPYPHPESILHS
VSTTSQQFTPNEPPPPPSSSPPPLPPLPPMPQYSLTQYMQTAGSVTSLPYSYGMAQQQLP
AMPSYLTTGAPVNGIPPFTTPPTNSYQGFQGSEGNIYNQASSMPMAPISRQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggggagtacattcaatcctcagattttagtggagaagctagccaagctcaacaattca
caggcgagtatagagactttatcacattggtgtatattccatatgaataaagcaaagcaa
gttgttgaaacatgggatcaacggtttcatggttctccacgtgagcagagattggccttt
ctatatcttgcaaatgacatattgcagaacagtaggcgaaagggttcagagtttgttggt
gaattttggaaggttcttccagatgctcttcatgatgtgattgaaaacggggatgagtat
ggaaggaatgctgcactccgattgtttttcctcatgcagataagtatatgggaggagaga
aaagtttttggttctcgggggcagattcttaaggaaggactggtgggtggtaggcacatg
gaaaatagtaatagaaatggaaagaatttgaacttcaaactgagaccatctgctggaaat
atattggaaaaaattgtttcagactatcatgctgtttatggtggccagttggatgaagac
gttatattaagcaaatgcagcaatgctgttagcagtcttgagaaactagataaggagatt
ggtggtgatattaattcagggcaattccatggatctgcatttgtggaggagctgagaggg
cagcatgctatactgagggactgtattgaacaactaacggcagttgaatcatccagagca
agtcttgtctctcatttaagagaggctctccaggagcaggaatttaagctggatcgagac
cgtaaccaacttcaggctgcacattcccaatcagaacaggcaggtaatatctgccaacag
ttactagatagaaacaaaggtcggtcaccagctgagccaagcccgagggaatctcaaaca
tccatggcacctcacagctttgtaccaggagatagggaacaatctgctccagtaatgtac
acacggcaggtttcctttcctgaaaaatctggccaggttgaggatgacccacgcaagtct
gctgctgctgcagtggcagcaaagctaaccgcatcaacatcctcggcccagatgctctct
tatgtcctatcctcccttgcatcagagggagtcgtaggaaatccagtgaaagaatcccct
agtgcttaccctcatgaaaaaaggcataagctcgaaaatgaccaatcctcttacatacct
cagaatcttcaacaaaaaccagttcctccttaccctcatccagaatctatactacacagt
gtctctaccaccagccaacagtttactccaaatgagccaccgcctcctccctcatcgtct
cctcctccattgccaccactaccacctatgccacaatattcactaacccagtacatgcaa
actgctggatcagtaaccagtctaccatacagctatgggatggcccaacaacagctgcct
gcaatgcctagttatttgacaaccggggctccggtgaatggaattcccccctttacaaca
cctcctacaaattcttaccagggttttcagggttctgagggtaatatctacaaccaagca
tcgtccatgccaatggctccaatttctcgacaatag
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