Juglans regia (English walnut): 109003593
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Entry
109003593 CDS
T05245
Name
(RefSeq) cyclin-dependent kinase D-3-like
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03022
Basal transcription factors
jre03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109003593
09124 Replication and repair
03420 Nucleotide excision repair
109003593
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
jre01001
]
109003593
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
109003593
03019 Messenger RNA biogenesis [BR:
jre03019
]
109003593
03400 DNA repair and recombination proteins [BR:
jre03400
]
109003593
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
109003593
2.7.11.23 [RNA-polymerase]-subunit kinase
109003593
Protein kinases [BR:
jre01001
]
Serine/threonine kinases: CMGC group
CDK family
109003593
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109003593
Messenger RNA biogenesis [BR:
jre03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
109003593
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109003593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Kinase-like
HYPK_UBA
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
109003593
NCBI-ProteinID:
XP_018837342
UniProt:
A0A2I4G0B8
LinkDB
All DBs
Position
3:7304128..7311853
Genome browser
AA seq
407 aa
AA seq
DB search
MSELDLSKKVADRYLKREVLGEGTYGVVYKAIDTKTGQKVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRKFTHQVFARWYRAP
ELLFGTKQYGAGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDLV
YLPDYVEYQHVPAPPLRSLFPMASDDALDLLSKMFTYDPKARISVQQALEHRYFSSAPLP
TDPDKLSRPAPKRDSRVSDFNSHDGPTVLSPPRKTRRVMPDREGLEGIFHHIDKIEANGE
NASRNEPVPMSVDFSIFGAKPPNRPTINSADRSHLKRKLDLEFQHPE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagctcgatctgtccaagaaagtcgccgatagatatctgaagcgagaagtcctc
ggagaaggtacctacggggtcgtctacaaagccattgataccaagacaggacagaaagtc
gcaattaaaaagattcggcttgggaagcaaaaggaaggggtaaattttacggcacttaga
gaaatcaagctccttaaagagcttaaagatccgaatataattgagttgattgatgcgttc
cctcataagggtaacttgcacctagtgtttgagttcatggagacagaccttgaagctgtt
attcgggaccggaatatatttctttcgccggctgacataaaatcttatcttcagatgaca
cttaaaggacttgcttactgccacaaaaaatgggttttacatagggatatgaaaccaaac
aacttgttaataggatctaatggacagctcaaacttgcagattttggtttagcacgaata
tttgggagcccagatcgcaagttcactcaccaggtttttgctcgatggtatagagcacct
gagctgttgtttggtaccaagcaatatggcgctggggtggatgtttgggctgccgcttgt
atatttgctgaacttctcctgcgtcgaccttttctgcagggttcaagtgacattgatcaa
ttgggaaagatctttgctgcatttgggacaccaacaccatcccagtggcctgatctggta
taccttcctgattatgtggagtaccagcatgttcctgcaccccctttacgttccttgttt
ccaatggctagtgatgatgctttagatctgctgtcgaagatgtttacttatgatccaaaa
gctagaatatcagtgcagcaggcattagagcaccggtacttctcatctgcaccactgcct
acagatccagataaactctccagacctgcacctaagcgggactctagggtttctgatttt
aattcacatgatggtccaaccgtcttatcacctccaagaaagacaaggagagtgatgccg
gaccgtgagggcttggaaggaatttttcatcatattgataagattgaggcaaatggtgaa
aatgcaagcaggaatgaaccagtaccaatgtcggtagacttttctatctttggagcaaaa
cctccaaacaggcccacaattaacagtgctgacagatcacatttaaaaaggaagttagat
ctggaattccagcaccccgaataa
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