Juglans regia (English walnut): 109003772
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Entry
109003772 CDS
T05245
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109003772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109003772
Spliceosome [BR:
jre03041
]
Complex B
Other components
Prp19-related factors
109003772
Complex C
109003772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
RRM_occluded
zf-CCCH_2
zf-CCCH_3
RRM_3
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
109003772
NCBI-ProteinID:
XP_018837602
UniProt:
A0A2I4G125
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Position
5:complement(7306486..7310557)
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AA seq
516 aa
AA seq
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MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADFDKECKICTRPFTVFRWRPGR
DARFKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKARPNDTILKLQRTTPYYKRNRAHVCSFYIRGECTRGAECPYR
HEMPVTGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEAPEDESIKTLYVGGLNERVT
EQDLRDNFYAHGEIESIRMVPQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPKPESEGADEARQQAAVAHSGMLPRAIISQQQGQLQPPGSQAQNQPMHYFNIPPPPP
QQERTFYPSMDPQRMGALIPSHEGTSNGPSGSGENKSGPEKQQQAQHYPFQAMPPPHGQY
HQQFYPPYGYMQPMPPYQQYPPPYHSGMPPPQPPPANQPYQHSAPSVSHPGSAPPASTAH
TGSTPPGSAQQGSRPSGSAPPGSGPSGSSTPGSSQQ
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcccatagattgcttagagatctggaggccgatggctgggaacgttccgactttcca
atcatctgtgagtcctgcctcggcgacaacccctacgttcgaatgacaaaagcagacttt
gataaggagtgcaagatttgtacacggccattcacagtttttaggtggaggcctggtcgt
gatgccagatttaaaaaaactgagatttgccagacatgcagtaagttgaaaaatgtttgc
caagtctgccttctggatctcgaatatggtttgccagttcaagtccgagacactgctctt
tccatcaattccaatgatgccattcccaagagtgatgtgaatagggagtattttgctgag
gagcatgaccgccgggccagagcagggattgattatgaatcatcatatggaaaggctcgc
ccaaatgacaccattctgaagcttcaaagaacaacaccttactacaaaagaaacagagcg
catgtctgcagtttttacataaggggtgaatgcacgcgaggtgctgagtgcccgtaccga
catgagatgcctgtaactggggaattgtcacagcagaatattaaagatcgttactatgga
gtgaatgatccggttgcactgaagctactcaacaaggcaggagagatgccatctctggaa
gctcctgaggatgagagcattaaaactctctatgttggtgggcttaatgaaagggtcacc
gagcaggatctgagggacaacttctatgctcatggtgaaattgaatccataaggatggtg
ccccagcgagcttgtgcttttgtaacctacacaaccagagaaggcgcggagaaggctgca
gaagagctctcaaacaaattggtcataaaaggcctgagactgaagctaatgtggggtaga
cctcaagcaccaaaaccagagtcagaaggcgcagacgaagcaaggcagcaggcggcagtg
gcccatagtgggatgttgcctcgggcaattatatcccagcagcagggccaattacagcca
cctggcagtcaggcccaaaaccaaccgatgcattacttcaatattcctccacctccgcct
cagcaggagagaaccttttacccatcaatggatcctcaaagaatgggcgcccttattcca
tcccatgagggtacttctaatgggccctcagggtcaggtgagaacaaatctggtccagag
aagcagcaacaagcccagcattatccttttcaagctatgccgccaccacatgggcaatat
catcagcagttctatcccccatatggatatatgcagccaatgcctccttatcagcaatat
cctccaccatatcattcgggaatgccacctccacagcctccacctgcaaaccagccttat
cagcattctgcgccttctgtttctcaccctgggtctgcaccaccagcatccactgcgcac
acaggttctacaccaccaggatctgcacaacaggggtccagaccttctggatctgcacct
ccggggtctggaccttcggggtcctctacaccagggtcatcgcagcagtga
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