Juglans regia (English walnut): 109012703
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Entry
109012703 CDS
T05245
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
jre
Juglans regia (English walnut)
Pathway
jre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109012703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
jre03041
]
109012703
Spliceosome [BR:
jre03041
]
Common components
Common spliceosomal components
SR proteins
109012703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
RRM_7
Motif
Other DBs
NCBI-GeneID:
109012703
NCBI-ProteinID:
XP_018850026
UniProt:
A0A2I4H1I4
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All DBs
Position
11:2559338..2570257
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AA seq
290 aa
AA seq
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MSSRSSRTIYVGNLPGDTRMREVEDLFYKYGRIVDIDLKLPPRPPGYAFIEYEDPHDAED
AIYYRDGYDFDGCRLRVELAHSGRSYSSSVDRYGSYGGSSSSRGLPRHSDYRVLVTGLPP
SASWQDLKDHMRQAGDVLFSQVYRDRGGMKGIVDYAHYDDMKYAIKELDDSKXFNRSYIR
VREYDSRRSYSRSRSCDSRRSYSHSSYISRSPSRSRSYGGRSRSISPEREYSHQSPSESR
SRSPPKSRSLVTSANHKRRSRSRSRRSLSQSRSPAARSERSKSVDSKDRY
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgctcaagccgtaccatctatgttggaaatctccctggtgacactcgaatg
agagaagtagaagatctgttttataagtatgggcgtattgttgacattgatctgaagctc
ccaccaagacccccaggctatgcttttattgaatatgaagacccccatgacgcagaagat
gcaatttattaccgggatgggtatgactttgatggctgtcggttgcgagttgagcttgca
catagtgggcgatcatattcatcatcagtggatcgctatggtagttatggtggcagtagt
agcagccgtggtcttcctaggcattctgactatcgtgttttggtcactggattacctcct
tctgcttcatggcaagacctgaaggatcacatgcgtcaagctggtgatgtccttttctct
caagtataccgtgatcgtggtggcatgaaaggaattgtggattatgcacattatgatgac
atgaagtatgcaataaaagaattggatgactccaaantttttaatcggtcatatatacgg
gtgagggagtatgactcaaggcggagctactctcggagtcgcagctgtgattcgaggcgg
agctattctcatagttcttatatatcaagaagccctagtcgcagccgaagctatggtggc
aggagcaggagcatatctccagagagagaatattctcaccaatctccatcagaatctcgt
tcaagatccccaccaaaatccagatctctagttacttctgctaaccataaacgccgcagt
aggagtcggagtcgcagaagtttatcacagtctcgctcaccagctgcaagatctgaacgg
agcaaatctgtagactccaaggatcgctattga
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