Kordia antarctica: IMCC3317_00690
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Entry
IMCC3317_00690 CDS
T06371
Symbol
sigW_1
Name
(GenBank) ECF RNA polymerase sigma factor SigW
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kan03021
]
IMCC3317_00690 (sigW_1)
Transcription machinery [BR:
kan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IMCC3317_00690 (sigW_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DNA_pol3_delta_C
DUF5624
Motif
Other DBs
NCBI-ProteinID:
QHI34725
UniProt:
A0A7L4ZDE9
LinkDB
All DBs
Position
72944..73453
Genome browser
AA seq
169 aa
AA seq
DB search
MKQADFLHMILPFKDKLYRLAKRLLVSSEEAEDATQEVLLKLWSKKTKIETYTNVEAFAM
TMTKNYCLDKLKSKQASNLKLVHSNYTDENTSLERELELKDSVNFVHEIMNQLPDQQKII
IQLRDIEQYDFEEIAKVVNMNPTAIRVALSRARKYIREELTKKHNYGVS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggcagattttttacatatgatattgccttttaaagacaaattgtaccgattg
gcaaagcggttgctagtttccagtgaagaagctgaagacgcaactcaagaagtattattg
aaattatggtcgaaaaaaacgaagattgaaacgtatactaatgtagaagcttttgcaatg
acaatgactaaaaattactgtttggacaaattaaaatcaaagcaagcaagcaatttaaag
ttagttcacagtaattatacagatgaaaatacatcgttagaacgagaattagaattaaaa
gatagtgtcaattttgttcatgaaattatgaatcaattaccagatcagcaaaaaatcatt
attcaactcagagatattgagcaatatgattttgaagaaattgcaaaagtggtaaatatg
aatccaaccgcaatacgcgtagcattatcaagagcaagaaagtacataagagaagaactc
acaaaaaaacacaactatggagttagttaa
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