Kitasatospora aureofaciens: B6264_30645
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Entry
B6264_30645 CDS
T05021
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
kau
Kitasatospora aureofaciens
Pathway
kau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
kau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B6264_30645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kau03400
]
B6264_30645
Enzymes [BR:
kau01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
B6264_30645
DNA repair and recombination proteins [BR:
kau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B6264_30645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID:
ARF83294
LinkDB
All DBs
Position
unnamed1:155410..156354
Genome browser
AA seq
314 aa
AA seq
DB search
MSPRGSAQVTLPHVEPMLATAGPLPAGPGWMGEVKWDGVRCVAYVPEAAPVRLLGRHGTD
LTDRFPEVVEALTMRGPLVLDGELVVMRGGRPSFAALQGRVHRTRPAAVRTGAAATPAVF
VAFDLPHTGERSLLIEPYARRRQLLEGLELERPGLRVPPAWDSITEAFGWTREHGLEGVV
AKRSDSPYRPGTRSRDWIKIKHLRTADVVIGGWLPAPREASVRAVLVGVPVEAEGRLTFV
GSVGTGFAGAERRALAAVLRRIDSPVSPFTAAGLGLPRGTLVRFVRPELRAEVEFLELTD
AGRLRQPVWRGLRG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtccccggggatcggcgcaggtgacgctgccgcatgtcgagccgatgcttgcgaca
gccggcccactgccagccgggccaggatggatgggggaagtgaagtgggacggggtgcgg
tgcgtggcctatgtgcccgaggccgcgccggtccggctgctcggccgccacggaacggac
ctgaccgaccggtttcctgaggtggtcgaggccctgacgatgcgcgggccgctagtcctg
gacggcgagctcgtggtcatgcgcggaggccgcccctcgttcgcggccctgcagggccgc
gtccaccgcacgcgtcccgccgcggtacggaccggggcagccgctacacccgccgtcttc
gtggcgttcgacctcccgcacaccggggagcgatcactgctcatcgagccgtacgcgcgg
cggcgacagctgctggagggcttggagctggagcggccgggcctacgggtgccgccggcg
tgggactcgatcaccgaggcgttcggctggacacgggagcacgggctggaaggtgtcgtc
gccaaacgatccgattccccgtaccggcccggcacacgctcccgggactggatcaagatc
aagcatctgcgtaccgccgacgtcgtgatcggcggctggctgcccgccccccgtgaagca
tcggtccgcgcggtcctggtcggcgttccggtcgaagccgaagggcgactgacgttcgtc
ggctcggtcggcaccgggttcgccggggcggaacgccgcgccctcgctgccgtgctgcgg
cgcatcgactccccggtgtccccgttcaccgccgccggactgggactgccacgcggcacc
ctggtccgattcgtccgccccgagctgcgcgccgaggtcgagttcctcgaactcaccgac
gccggtcggctccgtcagccggtgtggcgaggtctgcgcggctga
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