Kluyvera cryocrescens: RIN60_02595
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Entry
RIN60_02595 CDS
T09399
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy02020
Two-component system
kcy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RIN60_02595 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RIN60_02595 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kcy03021
]
RIN60_02595 (rpoN)
Transcription machinery [BR:
kcy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RIN60_02595 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WNN72280
LinkDB
All DBs
Position
complement(543751..545184)
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHEEVETQE
AADTETLDSVDALEKAEMPEELPLDASWDEIYTAGTPSGTGVDYQDDELPVYQGETTQSL
QDYLMWQVELTPFTDTDRAIATSIVDAVDDTGYLTVTLEDIREGMGNDDIGLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFAPDTPRITEARLIIAEHLDLLANHDFRSLMRVTR
LKEDVLKEAVDLIQSLDPRPGQSIQTGEPEYVIPDVLVRKVSGRWMVELNADSIPRLQIN
QHYAGMCNNARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFDLGEE
HMKPMVLADIAQTVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVSTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaattaaggctcagccaacagcttgccatgacgccgcagctacag
caggcgatccgtctgttgcaactgtcgacgctggaacttcagcaggaactccagcaggcg
ctggaaagtaaccccctgcttgagcaaaccgatcttcacgaggaagtagaaacccaggaa
gccgctgataccgaaacgctggacagcgtggacgcgctggaaaaagcggaaatgcccgaa
gagctgccgcttgacgccagctgggatgaaatttataccgccggcacgccatcaggcacc
ggcgttgattatcaggatgatgagttaccggtctatcagggtgaaaccacccagtcctta
caggactatctgatgtggcaggtcgaactgacgccgtttactgataccgaccgcgccatt
gccacgtcgatcgtggatgctgtcgatgacaccggctatctcaccgtgacgctggaagat
attcgcgagggcatgggtaacgacgacatcggccttgatgaagtcgaagcggtgcttaag
cgtattcaacgtttcgatcccgtcggcgtcgctgcgaaagatctgcgcgactgcctgctg
atccagctttcccagtttgctcctgacaccccgcgaatcactgaagcgcggctgatcatc
gccgaacacctcgatctcctcgccaaccacgacttccgctcgctcatgcgcgtcacgcgg
ctgaaagaagacgtgctaaaagaagccgttgatctgattcaatcgctagatccacgccca
gggcagtcgatccaaaccggcgagccggagtacgtcatcccggacgttctggtgcgtaaa
gtcagcggtcgctggatggttgagcttaatgctgacagcattccacgtttgcagatcaac
cagcattacgcgggcatgtgcaataacgcccgcaacgatgccgacagccagtttatccgc
agcaatctgcaggatgcaaaatggttgattaaaagccttgagagccgtaacgacacgctt
ctgcgcgtcagccgctgcatcgttgaacagcagcaggcctttttcgatctcggcgaagaa
catatgaaaccgatggtgctggccgatatcgcccagaccgtcgagatgcacgagtccacg
atttcgcgtgtcaccacgcaaaagtatttgcatagcccacggggcatttttgagcttaag
tatttcttctccagtcacgtgagtaccgaaggcggtggcgaagcctcttccacggcgatt
cgcgcgttggtgaagaaattaattgccgcggaaaatcccgcgaaaccactgagcgacagt
aaactgaccaccatgctctctgaacagggtatcatggtggcacggcgtaccgttgcaaag
taccgagagtctttatccatcccgccgtcaaaccagcgtaaacaactggtctga
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