Candidatus Kinetoplastibacterium desouzaii: CDSE_0639
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Entry
CDSE_0639 CDS
T02465
Name
(GenBank) DNA-directed RNA polymerase sigma subunit RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kde
Candidatus Kinetoplastibacterium desouzaii
Brite
KEGG Orthology (KO) [BR:
kde00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CDSE_0639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kde03021
]
CDSE_0639
Transcription machinery [BR:
kde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CDSE_0639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
GerE
Motif
Other DBs
NCBI-ProteinID:
AGF46932
UniProt:
M1LMH5
LinkDB
All DBs
Position
complement(423250..425496)
Genome browser
AA seq
748 aa
AA seq
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MVTKITGENKEVSKTSLKKKKINDLQEKDAKLLTQNKESSKSKNYKKDHIKIKALSDSSE
NIFSQLDENVFINIKSNLLSKKSLNIIQDNDIEDSSNDEVFDDDSSDIDSNDVAAYSKTI
NKRGRKSKNDAKDLISKGPISQEEYESRRNNLKNLIKLGKEKGYLTFSEINDTLPDDLFD
DEVVDTIVSTFNDMGISVYEQAPDVDTLLMSETAPIISNDDDVEDETEVALTTVDSDFGR
TTDPVRMYMREMGTVELLTREGEIEIAKRIEEGLSLMIASISACPTTLNEILLDIDRVSS
GQIQIDEVVDGLIDPDDGEEYAGIGFIEEEEFDEDTTGVMSSKQLENLKTKSLQKFSEVS
KLLEQMKFAYYNHGYCSKDYLEAKDSIQKELMGVRFNAKMVEKLADSIRSHMKEIRIIER
NILDICVEKAGMPREDFISFFVGKESNLNWLIEDPVINSKYFKLLEPFSLMIQSVQKKLL
EIQEKIILPIKDFKEINKQMTSGESKARKAKKEMTEANLRLVISIAKKYTNRGLQFLDLI
QEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNR
ISRQILQETGMEPDPSVLSKQMDIPEDKIRKILKIAKEPISMETQIGDDDDSHLGDFIED
TTTLAPSDSALHGSMRDIVKEVLDSLTPREAKVLRMRFGIEMNTDQTLEEVGRQFDVTRE
RIRQIEAKALRKLRHPSRADKLKSFLDN
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggtaactaagattactggtgaaaacaaagaagtttcaaaaaccagtttaaaaaaaaag
aaaattaatgatttacaagaaaaagatgctaagttattaacacaaaataaagaatcatct
aaatctaaaaattataaaaaagatcatataaaaattaaagcattatctgatagttctgaa
aacatattttctcaactagatgaaaatgtatttatcaatataaagtcaaatcttttgtca
aaaaaaagccttaatataatacaagacaatgatatcgaagatagttctaatgatgaggtt
tttgatgatgattcatcagatattgatagcaatgatgtagcagcttatagtaaaaccatt
aataagcgtggtagaaaaagtaaaaatgatgctaaagatttaatttccaaggggcctata
tcacaagaagaatatgagtctcgacgtaataatcttaagaatcttattaaattagggaaa
gaaaaaggttacttaacttttagtgaaataaatgatactttaccagatgatttatttgat
gatgaagttgtagataccatagttagtacttttaatgatatgggtatatctgtgtatgaa
caagcaccagatgtagataccttattaatgagtgaaactgctcctataatttcaaatgat
gatgatgttgaggatgaaactgaagttgctttgactactgtggattctgattttggtaga
acaacagaccctgttcgtatgtatatgagagaaatgggtactgtagaattgttaacaaga
gaaggggaaatagagatagcaaaaagaatagaagaaggtttgagtttaatgattgcttct
atttctgcttgtcctactactttaaatgagattttattagatatagatcgtgttagttct
ggtcaaatacaaatagatgaagttgtagatggtttaatagatcctgatgatggtgaagaa
tatgctggtataggttttattgaagaagaggaatttgatgaagatacaacaggagttatg
tctagtaaacagctagagaatttaaaaactaaaagtttacagaagttttcagaggttagt
aaattattagagcaaatgaaatttgcatattataaccacgggtattgttcaaaagattat
ttagaggcaaaagattctatacaaaaagaacttatgggtgttagattcaatgctaagatg
gtagaaaaattagctgattctattagatctcatatgaaagaaattagaattatagaaagg
aatattttagatatttgtgttgaaaaagcaggtatgcctagagaggactttatttctttt
tttgttggtaaagaaagcaatttgaattggttaatcgaagatcctgtaataaatagtaaa
tattttaaattattagaacctttttctttaatgatacaaagtgttcaaaaaaaattatta
gaaattcaggaaaaaattatattgccaattaaagatttcaaagaaatcaacaaacaaatg
acaagtggagaaagtaaagcgcgtaaagcaaaaaaagaaatgacagaagctaatttacgt
ttagtaatatctatcgcaaaaaaatatacaaatagaggtttgcaatttcttgatttaatt
caagaggggaatataggtttaatgaaagctgtagataaatttgaatatcgtaggggatat
aaattttctacatatgctacgtggtggattaggcaggcaattactaggtctattgctgat
caagcaagaacaattcgtatacctgttcatatgattgaaactataaacaagatgaatcgt
attagtcgtcaaattctacaagaaacaggtatggaaccagacccttcagttttatctaaa
caaatggatattcctgaagataaaattagaaaaatattaaaaattgctaaagagcccata
tctatggaaacccaaataggtgatgatgatgattctcatttgggagattttatagaagat
acaactacattggctccttcagattctgctttacacggatcaatgagagatatagtcaaa
gaagttcttgattctttaacaccaagagaagctaaagttttaagaatgagatttggtata
gaaatgaatacagatcaaacattagaagaggttgggcgacaatttgatgttactagagaa
cgtattaggcaaattgaagctaaggctttgagaaaattaagacatcctagtagagctgat
aaattaaaaagttttttagataattaa
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