Dokdonia sp. 4H-3-7-5: Krodi_2876
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Entry
Krodi_2876 CDS
T01484
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03030
DNA replication
kdi03430
Mismatch repair
kdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Krodi_2876
03430 Mismatch repair
Krodi_2876
03440 Homologous recombination
Krodi_2876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_2876
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2876
Enzymes [BR:
kdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Krodi_2876
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Krodi_2876
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Krodi_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
RuvB_N
AAA_22
AAA_14
DNA_pol3_gamma3
Rad17
TIP49
DNA_pol3_delta_C
AAA_5
AAA_30
AAA_24
AAA_7
ResIII
AAA_16
DNA_pol3_delta
AAA_18
DUF815
Mg_chelatase
AAA_assoc_2
nSTAND3
RNA_helicase
Hamartin
Sigma54_activ_2
T2SSE
AAA_2
TsaE
ChapFlgA
DUF4813
Motif
Other DBs
NCBI-ProteinID:
AEE20851
UniProt:
F4B3G4
LinkDB
All DBs
Position
3256372..3258276
Genome browser
AA seq
634 aa
AA seq
DB search
MEPFIVSARKYRPTTFKDVVGQQAITNTLENAIRNNHLAQALLFCGPRGVGKTSCARILA
KQINTDENTSPDEDFAFNVFELDAASNNSVDDIRSLIDQVRIPPQVGKYKVYIIDEVHML
SAAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRITVTDARKHLVQIA
IEEGIEADEEALHIIAQKADGAMRDALSIFDRVVSFSGKTLSRKAVTENLNVLDYDTYFT
TTDYLLTNDIPQVLVQYNDILSRGFDGHHYIAGLASHFRDLMVCKNPPTIHLLEVGDTTK
KKYYEQSQKTDMAFLMEAINIANDCDLKFRTSRNQRLLVELCLMQLASITFDGEKKNDGP
FLVPPSYYKVDHTQTGAATQTQTAVTPNNTAATQAPSATNAALVAAPAAQATSTPTPAVS
APAQTPVQENTVAPNAVAPQATQAQTQNAAPVQNTAATQQPAPVTPQASPTTPSVPELSL
RKDRVSGLSLKGLQRKKELELKKANKKVDVENLPTEPFTEIAMQAAWAEYVKRLLAKGER
IIASNLEADQPTLNGTTIELEYPNETMKIEVERAQGPLLEFLKRSLNNYDITLGITVNEE
VQRKYAYTAQERYDKLREHNPALDILRKTFDLDL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaaccttttatagtatctgcccgaaaataccgtcccaccacctttaaagatgttgta
ggacaacaggctattactaacactttagaaaacgcaatacgcaataaccacctcgctcag
gcgctacttttttgtggtcctcgtggtgtgggtaagacgtcttgtgcacgtattcttgca
aagcaaatcaatactgacgagaacacaagtccagatgaggactttgcttttaacgtattt
gagcttgatgcagcctcaaacaactcggtagatgatatacgtagtcttatagatcaagta
cgtatcccaccacaggtaggaaagtacaaggtgtatattattgatgaggtgcacatgctc
tctgctgcggcctttaatgcgtttcttaaaacactagaagaacctcctaagcacgctatc
tttatactagcgactacagaaaaacataaaatcatccctacgatactgtctcgttgtcag
atttttgacttcaagcgtattacagtaacagatgctcgtaagcaccttgtacagatcgcg
atagaagaaggtattgaagcagatgaagaagcactacatatcattgctcaaaaggcagat
ggagcgatgcgtgatgccttatccatttttgaccgcgtagtaagttttagtggtaaaacg
ctttcgcgaaaagcagtgacagagaacttaaacgttcttgactacgatacttatttcacc
accacagattatctacttacaaacgatatcccacaagtactggtacagtataatgatatt
ttatctcgtggttttgatggacatcactacatagctggtcttgcatctcactttagagac
ttgatggtttgtaaaaatccgccgacgattcatttactggaagttggtgatacgactaag
aaaaagtactacgagcaatcacaaaagaccgatatggctttcttaatggaagctatcaat
attgcaaatgattgtgatctcaaatttagaaccagccgtaaccagcgacttctagtagaa
ctttgtctcatgcaacttgcctctatcacttttgatggagaaaaaaaaaatgacggtccg
ttcttagtacctccttcttattataaagtagatcatacacagactggcgcagcgacacaa
acgcaaacggcagtcactccaaataatactgcagctacacaagcaccaagtgctacaaat
gctgctctagtagcagcacctgctgcgcaagctacgagtactcctactccagcagtttct
gctcctgcacaaactcctgtacaagaaaatactgttgcaccaaatgcagtcgctccacaa
gcaacgcaagcgcaaacgcaaaatgcagctcctgtacaaaatacagcagccacacagcaa
cctgctcccgtaacacctcaagcttcaccaacaactcctagcgtaccagaattatcgttg
cgcaaggatcgtgtgtctggattgtcacttaaaggtttacagcgtaaaaaggagctagag
ctaaagaaagcgaacaaaaaagtagatgtagaaaatctacctacggagccatttacagaa
attgcaatgcaagctgcctgggcagagtatgtaaaacgccttcttgccaagggagaacgt
attattgcctctaacctagaagcagatcagccgacattgaatgggactaccattgaacta
gaatatcctaacgagacgatgaaaattgaggtagaacgcgctcaagggccgctacttgaa
tttttaaaacgtagcctcaacaattatgatattactttagggattacggtaaatgaagaa
gtacagcgcaaatatgcctatactgctcaagaacgatatgataaactacgagaacacaat
cctgcgctagatattctcaggaaaacgtttgatctcgacctataa
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