Klebsiella sp. M5al: BWI76_01245
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Entry
BWI76_01245 CDS
T09148
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
klm
Klebsiella sp. M5al
Pathway
klm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
klm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWI76_01245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
klm03019
]
BWI76_01245
03400 DNA repair and recombination proteins [BR:
klm03400
]
BWI76_01245
Enzymes [BR:
klm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BWI76_01245
Messenger RNA biogenesis [BR:
klm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BWI76_01245
DNA repair and recombination proteins [BR:
klm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BWI76_01245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ARI06259
LinkDB
All DBs
Position
254595..256421
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AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQDTIIDTALAGRDCLVVMPTGGGKSLCYQVP
ALVLGGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQQEVMAGCRSGQIRLLY
IAPERLMLDNFLEHLTHWNLSMVAVDEAHCISQWGHDFRPEYAALGQLRQRIPHIPFMAL
TATADDTTRRDIVRLLDLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLMRYVQDQRGKSGI
IYCNSRSKVEDTAARLQSRGISAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLMDARKAL
STIYRVNQRFGMGYVVEVLRGANNQRIRDMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGDVTLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQTPLTAGEMLSVNGVGTRKLERFGKEFMALIR
AHVDGDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaagcaggttttacaagagacc
ttcggctaccagcagtttcgcccgggccaggataccattatcgatacggcgttggccggg
cgcgactgcctggtggtgatgccgaccggcggcggcaagtcgctgtgttatcaggtgccg
gcgctggtgctgggcggtctgaccgttgtggtatcgccgcttatttccttgatgaaggac
caggtcgatcagctgctggctaacggcgtggcggcggcgtgcctgaactcaacgcagagc
cgggagcagcagcaggaggtgatggccggctgccgcagcgggcagatccgcctgctgtat
atcgccccggagcgcctgatgctggataacttcctcgagcatcttacgcactggaatctg
tcgatggtggcggtagacgaggcgcactgtatttcccagtggggccacgacttccgtccg
gaatacgccgcgttagggcagctgcgccagcggataccgcacatcccgtttatggcgctg
accgccaccgccgatgacaccacgcgtcgcgacattgtccgcctgctggacctgaacgat
ccgctcatccaggtcagcagcttcgaccgtcccaacatccgctatatgctgatggagaag
tttaagccgctggatcagctgatgcgctacgtgcaggaccagcgcggcaagtcggggatc
atctactgcaatagccgctcgaaagttgaagataccgccgcgcgcctgcaaagtcgtggt
attagcgcggcggcctaccacgccgggctggaaaatcatatccgcgccgacgtgcaggag
aaattccagcgcgacgatctgcaaatcgtggtggcgacggtggccttcggtatgggtatc
aacaaaccgaacgtccgctttgtggtgcatttcgatatcccccgcaatattgaatcctat
taccaggagaccgggcgcgccgggcgcgatgggctgcctgccgaggcgatgctgttttac
gatccggcggatatggcgtggctcagacgctgccttgaagagaagcccgccgggccgctg
caggacattgaacgccataagctcaacgcgatgggggcctttgccgaagcgcaaacctgc
cgccgcttagtgctgctcaactactttggcgaggggcgccaggagccctgcggcaactgc
gatatctgccttgacccgccaaaacagtacgacggtttaatggacgcgcgtaaggcgctg
tcgacgatttatcgcgttaaccagcgctttggtatgggctacgtggtggaagtgctgcgc
ggcgccaataaccagcgtattcgcgatatggggcacgataagctgccggtctacggtatc
gggcgcgaacagagccatgagcattgggtcagcgttatccgtcagcttattcatttgggg
ctggtcacgcagaatattgcccagcactctgcgctgcagcttaccgaagccgcgcgtccg
gtcctgcgcggcgacgtgacgctgcagcttgccgtaccgcgtattgtggcgctgaagccg
aaagcgatgcagaaatccttcggcggcaattacgatcgtaagctgttcgccaagctgcgc
aaactgcgtaaagcgattgccgatgaagagaatatcccgccctatgtggtgtttaacgat
gcgacgctgattgaaatggccgagcaaacgccgctgacggcaggagagatgctcagcgtc
aacggcgtcggtacgcgtaagcttgagcgctttggtaaagagtttatggccctgatccgg
gcgcacgtggatggcgatgatgagtag
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