Pantoea rwandensis: LH22_07665
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Entry
LH22_07665 CDS
T03331
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kln03009
]
LH22_07665
Enzymes [BR:
kln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LH22_07665
Ribosome biogenesis [BR:
kln03009
]
Prokaryotic type
rRNA helicases
LH22_07665
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AAA_22
Ins_allergen_rp
WSD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIR85346
LinkDB
All DBs
Position
complement(1640912..1642240)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLQALQEKGFTRPTAIQAETIPAALEGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMVDMGFAQDIETIAAETRW
RKQTLLFSATLEGENIKDFAERLLNDPVSIEADPSKSERKKIQQWFYRADNLEHKTKLLV
HLLKQPEAKRVVVFVRKRERLHELVTWLHEAGIRTSYLEGEMVQVNRNEAIKRINENRVN
VMIATDVAARGIDIDDVTHVINYDLPLTADIYLHRIGRTARAGRKGTAISLVEAHDHVLL
GKITRYINEPIKARIIEELRPESRAPSAKVTGKPSKKALAKRKERKEKEAEKPRVKQRHR
DTKNVGKRRQASGSSTPESGAE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaccacattctccgaactcgaacttgacgaaagcctgctgcaagcgctgcag
gaaaaaggcttcacgcgccccactgccattcaggctgagaccattcctgccgcgctggaa
ggccgtgacgttctgggttcggcgccaaccggaacggggaaaaccgctgcttttctgctg
cccgctttacagcatctgctcgacttcccacgcaaaaaatcgggcccgccacgtattctg
atcctcacgccaacccgcgaactggcgatgcaggttgccgatcacgcacgtgagttggct
aaacacacgcacctggatatcgccaccatcaccggtggtgtggcttatatgaaccacgcc
gaagtattcagcgaaaaccaggacatcgtggtggccaccaccggtcgcttgctgcagtac
atcaaagaagaaaactttgactgccgcgcggttgaaactctgattctggatgaagccgac
cgcatggtcgacatgggcttcgcgcaggatattgaaaccatcgcagcagaaacccgctgg
cgcaaacagacgctgctgttctccgccacgctggaaggcgaaaatatcaaagacttcgcc
gagcgcctgctgaacgatccggtatcaatcgaagccgatcccagcaaaagcgaacgtaaa
aagattcaacaatggttttatcgtgctgacaaccttgagcacaaaaccaagctgttggtg
catctgttaaaacagcctgaggccaagcgcgtggttgtgtttgtgcgtaaacgcgaacgt
ctgcatgaactggtgacctggctgcacgaagccggtattcgtaccagctatcttgaaggt
gagatggtgcaggtaaaccgcaatgaagcgattaagcgtatcaacgaaaatcgcgtcaac
gtaatgattgcgaccgatgttgcggcacgcggaatcgacattgatgacgtcactcacgtc
atcaactatgacctgccactcactgccgatatctacttgcaccgcattggtcgtacggca
cgtgctggacgtaaaggcacggcgatttcgttggttgaggcacatgaccatgtgctgctg
ggtaaaattacccgttatatcaacgagccgattaaagcgcgcatcatcgaagagttgcgt
ccggaatcacgtgcaccgagtgctaaagtcacgggtaaaccgtcgaaaaaagcccttgct
aagcgtaaagagcgcaaagagaaagaggctgaaaaaccgcgtgttaagcaacgtcatcgc
gacaccaaaaatgtcggtaaacgtcgtcaggcaagcggcagcagcacaccagagagcggt
gcagaataa
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