Pantoea rwandensis: LH22_11030
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Entry
LH22_11030 CDS
T03331
Name
(GenBank) type VI secretion system, core protein
KO
K07169
FHA domain-containing protein
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
LH22_11030
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_FHA_C
FHA
Yop-YscD_cpl
Motif
Other DBs
NCBI-ProteinID:
AIR85968
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Position
complement(2351316..2352431)
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AA seq
371 aa
AA seq
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MQFTIVQCNTDVPAKTVAFKPPGGTIGRSQDNDLVLPDESRAISRLQALVHISPEGECRL
TNQGSVTSVVLNGVALQRGSQVQLQHGDALQIGDYGLEVRDPACQSTQQDDPLTFFADSA
ADPLGMQQAFDVVPESTAARPERRTDPRLGIDPQSDAPSAPATLPQADQDKLLAALLEGM
GLNNGHHTTITEEQMRVTGRMLSLFSQGTVALLSSRSILKRGVKADMTMILNEANNPFKI
LPSGKTVLMQIYQSQMPGFMPPEAAVRDALVDLQAHQLGMIAGIRAIIAAMLQSFNPQRL
EEEARKDGVLPKLPFNGGRKAALWDYFSRHYQRTAGEIEDDFHTLFGEAFLHAYDMEVNQ
YKDSQTRTEDA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaccattgtgcagtgcaatacggatgtgccagcaaagacggttgcttttaaa
ccgcctgggggaaccattggccgcagtcaggataacgatctggtactgcctgacgaatcg
cgcgccatttcacgcttgcaggcgttggtgcatatctccccggaaggtgagtgccgtctg
accaatcagggcagtgtgacctcagtggtattgaacggcgtggcgctacagcgcggttca
caagtgcaattacagcatggtgatgcactgcaaatcggcgattatggccttgaggtgcgc
gatcctgcctgccagagcacccagcaggatgacccgctcacgttcttcgcggacagtgcg
gccgatccactcggtatgcagcaggcattcgacgtggtgccggaatccactgcggcgcgt
ccggagcgccgtactgatccacgcctgggtattgacccacaaagtgatgccccttcggct
cccgccacgctgccgcaagccgatcaagacaagctgctggccgcgctattggaaggcatg
gggttgaataatggccatcacacgacaatcaccgaagagcagatgcgcgtgacgggccgt
atgctgagcctgttctcgcaaggcactgttgccctgctctcttcccgttcgatcctcaaa
cgcggcgtgaaagccgacatgacgatgatcctcaatgaggcgaataatccgtttaaaatt
ttgccttcgggtaaaacggtattgatgcagatttatcagagtcagatgcccggtttcatg
ccgccagaagcggcagtgcgcgatgcactggtggatttgcaggcgcatcagttggggatg
attgcgggcatccgcgcgatcatcgcggcgatgctgcaatccttcaatccgcaacggctg
gaagaggaagcacgtaaagatggcgtgttgcctaagctaccgtttaacggcgggcgtaaa
gcggccttgtgggattacttttcacgccactaccagcgcactgccggtgaaattgaagat
gacttccataccctgtttggtgaagccttcctgcatgcgtatgacatggaagtgaatcaa
tataaagattcccagactcggaccgaagacgcatga
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