Koleobacter methoxysyntrophicus: H0A61_03038
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Entry
H0A61_03038 CDS
T07090
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
kme
Koleobacter methoxysyntrophicus
Brite
KEGG Orthology (KO) [BR:
kme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kme03019
]
H0A61_03038 (yhaM)
Messenger RNA biogenesis [BR:
kme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H0A61_03038 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
TraI_2
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QSQ10628
UniProt:
A0A8A0RT03
LinkDB
All DBs
Position
complement(3092354..3093304)
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AA seq
316 aa
AA seq
DB search
MTNSKILIKDIQQGDFVNSKFAVVEKSLSLGKNGKYLRLILGDATGRIEARVWNDAEQVS
FLFNVNDVVDVEAVAVDYNGIQLNIKRISKADSYNPLDFLPTSSKDIAKMWDSFRKTISD
EISDIMLKKLLYSIFDDRIIEQKFKKSPAALTVHHAWIGGLLEHTLEVVHLCSFISRTYP
ESLNKELLIAGAMLHDLGKISEYAVSGVSFQQTDTGKLLGHPVIGCSMLKQKIDSIQGFS
ASTAVLLQHMVLSHHGKLEWGAPVKPQTVEAEMLFLCDLISARKTRFDVVKETCEKESWS
AWDRFLERRVFAGNNR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacgaattcaaaaatattaatcaaagatattcagcagggcgatttcgttaactcaaaa
tttgccgtggtcgaaaaatctttgagtttgggtaaaaacggaaaatatttgaggctcatc
ctgggcgatgccacaggcaggatagaagcgagagtctggaatgatgccgaacaggttagt
tttctttttaatgtcaatgatgttgtggacgtagaagcggtagctgtggactataacggg
atacagcttaacatcaaaagaatatcaaaggcagatagttacaaccctttagattttctg
ccgacatcttcgaaggatatcgccaaaatgtgggacagttttcgtaaaactatatcagac
gaaatatcagatataatgctaaaaaaactgctttattcaattttcgatgatcgaataatt
gaacaaaaattcaaaaaatcgcccgcggctctaaccgttcaccacgcatggataggcggt
ttgctggaacatacgctggaagttgtacatctctgcagtttcataagcagaacatatccc
gaatctctaaacaaagaactgctgattgcaggtgctatgctccacgatctggggaaaata
tcggaatatgctgtttccggtgtatcctttcagcagacagacaccgggaagcttctgggg
catcctgtgataggatgcagtatgttaaaacaaaagattgacagcattcaggggttttct
gccagcaccgcagtgcttctacagcatatggttctttcgcatcacggtaaacttgaatgg
ggagcacctgtaaaacctcaaacagtagaagcggaaatgctgtttttatgcgatttaata
agcgcgcggaagaccaggttcgatgttgttaaagagacatgcgaaaaagaatcgtggtcc
gcatgggataggttcctggaaagaagggtttttgctggaaacaacagatag
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