Klebsiella michiganensis RC10: VW41_06215
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Entry
VW41_06215 CDS
T03782
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VW41_06215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_06215
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VW41_06215
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VW41_06215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_22
AAA_30
AAA_33
DUF87
FAM76
Motif
Other DBs
NCBI-ProteinID:
AJZ88652
LinkDB
All DBs
Position
1306524..1308539
Genome browser
AA seq
671 aa
AA seq
DB search
MSKAFKLNSAFKPSGDQPEAILRLKDGLENGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLTELQ
YTRNDQAFQRGTFRVRGEVVDIFPAESDDLALRVELFDEEVERLSLFDPLTGQIDQTIQR
FTIYPKSHYVTPRERIVQAMEDIKVELADRRKVLLANNKLLEEQRITQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDIVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEENGITPQGLNKRVVDVLQLG
EGMAKTKGRVKTKARSVIEDDEVVMTPKALQQKIHQLETKMLEHAQNLEFEEAAQIRDQL
HKLRELFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgaattccgcatttaaaccttctggcgaccagccggaagca
atccttcgcctgaaagacgggctagaaaatgggctggcacaccagacgctgctgggtgta
acggggtcaggcaaaaccttcaccgtggcaaacgtaatagccgacctccagcgtccaacg
atggtgctggcgccgaacaaaaccctggcggcgcagctttacggcgaaatgaaagagttc
ttcccggacaatgcggttgagttttttgtctcctattacgactactatcagcctgaagcc
tatgtgcccagctctgacaccttcattgaaaaagatgcctcggtgaacgaacacatcgag
cagatgcgtttgtcggcgaccaaagcgctgctcgaacgccgggacgtcatcgtggtggca
tccgtgtcggctatctacggtctgggcgatcctgatctgtacctgaagatgatgcttcac
ctgacgaagggcatgatcatcgatcaacgttcgatcctgcgtcgcctcactgaattgcaa
tacacgcgtaacgatcaggcgttccagcgcggtacgttccgcgtccgaggggaagtggtc
gatatcttcccggcagaatcagacgatcttgcgctgcgcgtggagctgtttgatgaagaa
gttgaaagactgtcgctgtttgatccgcttaccgggcaaatcgatcagaccattcagcgt
tttaccatctaccctaaatcgcactacgtgacgccgcgcgagcgtattgtgcaggcgatg
gaagacatcaaagttgagctggcggaccgtcgcaaagtgctgctggccaacaacaagctg
ctggaagagcagcgtattacgcagcgtactcagtttgatcttgagatgatgaacgagctg
ggttactgctcggggattgaaaactactctcgcttcctgtccgggcgagggcctggcgaa
ccgcctccgacgctttttgactatcttccggccgatggcctgctggtggttgatgagtct
cacgtcaccattccgcaaattggcggcatgtatcgcggtgaccgcgcccgcaaagaaacg
ctggtggaatacggttttcgcctgccgtcggcgctggacaaccggccgttaaaatttgaa
gagtttgaagcactggcgccgcaaaccatctacgtgtcagcgacgccgggtaactacgag
ctggagaaatccggcggtgacatagttgaccaggttgttcgtccgacggggctgcttgat
ccggtgattgaagttcgtccggtggcaacgcaggtagacgatttgctttcagaaattcgc
aagcgtgtggcaatcaatgaacgtgtgttggtgacgaccttaaccaagcggatggcggaa
gacctgaccgaatatctggaagagcacggtgagcgcgtgcgctacctgcactcggatatc
gacaccgtggagcgcatggagattatccgcgatttacgcctcggtgagtttgacgtcctg
gtggggatcaacctgctgcgagagggtcttgatatgccggaggtgtcgctggtcgcgatc
cttgatgccgataaagaaggttttctgcgctccgaacggtcgcttattcagaccattggc
cgtgcggcgcgtaacgttaacggtaaggcgattctctacggcgataaaataacgccgtcg
atggcgaaagcgattggtgaaaccgaacgccgccgtgagaagcagcagcgctataacgaa
gaaaatggcattacgccgcagggcctcaataagcgagtcgtggacgtcctgcagcttggc
gaaggcatggcgaaaaccaaagggcgggttaaaaccaaagcgcgcagcgtgattgaagat
gatgaagtagtgatgacgccgaaagcgctgcagcagaaaattcaccagctcgaaaccaaa
atgctggagcacgcgcagaatctggagtttgaagaggcggcgcagattcgcgaccaactc
cacaagctgcgcgaactgtttatcgccgcgtcataa
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