Kryptolebias marmoratus (mangrove rivulus): 108228223
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Entry
108228223 CDS
T05608
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108228223 (ubtfl)
03021 Transcription machinery [BR:
kmr03021
]
108228223 (ubtfl)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
108228223 (ubtfl)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
108228223 (ubtfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
NOA36
Motif
Other DBs
NCBI-GeneID:
108228223
NCBI-ProteinID:
XP_017259223
LinkDB
All DBs
Position
Unknown
AA seq
701 aa
AA seq
DB search
MNGSSSVSSAMNSRIKGEADEWSKEDCLTLLDRIRTLLPEGDAMKYKTTESHFDWDKVGF
GGFTGDMCRQKWQKVSCEVRKYRTMTELIVDAIEFVKNPYKGKKLKTHPDFPKKPLTPYF
RFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYISEFQREKEEFEKNMARFK
EEHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPEVSQKELKEALRRQWSQLSDK
RRLKWISKALELQKDYEDSMRAYHEAHPDVNSDDHIRSVLTKAERQLKDKFDGRPTKPPP
NGYSLYCAELMVNMKDVPSTERMVLCSKQWKMLTQKEKDMFQKRCEQKKKQYDVDLQRFL
ESLPGEERDRVLSEEKMGGAKLNVGVASSPHRAKSPSVKERCREAEPEPWVQAGQPKDKR
DGTKTAKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQAAMEAAWKSMEKKEKIPWIKK
AAEDQKRYEVQYRPVRELFEIRTPAAGQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNH
FSLKERMVEIGKRWQKLSQSQKDKYKKLVEEQQVEYKAELEDWVKSLSPQDRAVYKEFSS
SKRRSTTKARSSPVTKVCVTAKAKVSGSRAVTPGVSVGKRAMAYRAKQDMSDSDEDKSES
TDSDEDDETSGSTDSEDEDENDEEEDEDQSSSEESSDLDSD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagcagtgtctcctcagccatgaactccaggatcaaaggtgaagcagat
gagtggagtaaggaggactgtctgaccctattagaccggatccggactcttctgcctgaa
ggcgacgccatgaagtataaaaccacagagtcgcactttgactgggacaaagttggtttc
ggaggattcaccggagacatgtgccgccagaaatggcagaaagtctcctgtgaggttcgg
aaatacagaacgatgacagaactcattgtggacgccatcgagtttgtgaagaatccatac
aaaggcaagaaactgaagacccacccagacttcccaaaaaaacctctgactccatacttt
cgcttcttcatggagaaacgagccaaatatgccaaaatccacccggagatgagcaaccta
gacctgaccaagattctgtccaagaagtacaaggagctgccggataaaaagaagcaaaag
tacatctctgagttccagcgggagaaggaagagttcgagaagaacatggctcggttcaag
gaggagcatccggagctgatcgaggagaggaagaagtcagacctgcccgaaaaacccaaa
accccccaacaactgtggtacaaccatgagaagaagacgtacatgaagctgcatccagag
gtgagtcagaaggagctgaaggaggccctgagaagacagtggtcccaactgtccgataaa
aggaggctgaagtggatcagcaaggccctggagctacagaaagactatgaggacagtatg
agagcatatcatgaagcccacccagatgtcaactcagacgatcacattcgctccgtcctc
accaaggctgagagacagctgaaggacaagtttgatggacggccaaccaaacctccacct
aacggatactcgctgtactgcgccgagctgatggtcaacatgaaggacgtcccgagcacg
gagcgcatggtgctctgcagcaagcagtggaagatgctgacgcagaaggagaaggacatg
ttccagaaacgctgcgagcagaagaagaagcagtatgacgtggacctgcagcggttcctg
gagagtcttccaggagaggagcgagacagagtcctgtcagaggagaaaatgggtggtgcc
aaattgaatgtgggcgtggcctctagcccacacagagccaagtctccatcagtaaaggag
cgctgccgggaggcggagccagagccctgggtgcaagctggacagcccaaagacaaacgg
gacgggacgaagacagcaaagcttcccgagacgccaaaaacagctgaggagatgtggcag
cacagcgtgattggagactacctggctaaatacagaagcgaccgccggaaggcgcaggcg
gccatggaggcggcctggaagtccatggagaagaaggagaagattccctggataaagaaa
gcagcagaggaccagaagcgttacgaggttcagtaccgacccgtgagggagctgtttgag
ataaggacgcctgctgccggtcagaggaagcctaagtttgacggcgaaccaaagaagccc
ccggtgagcgggtatcagatgttctcccaggagctcctgaccaatggagaactgaaccac
ttcagcctgaaggagcggatggtggagatcggtaaacgctggcagaagctgagccagagt
cagaaggacaagtacaagaagctggtggaggagcagcaggtggagtacaaggctgagctg
gaagactgggtgaagtcgctgtctccgcaggaccgggccgtctacaaggagttttcctcc
tcaaaacgtcgcagcaccacgaaagcccgcagcagccccgtcactaaagtctgcgtgacc
gccaaggcgaaagtgtccggatcgagagcagtcacccccggggtcagcgtgggcaagagg
gcgatggcgtatcgcgccaagcaggacatgtctgattcagacgaggacaagagcgaatca
acggactctgatgaagatgacgagacatcaggaagcacagacagtgaggatgaagacgag
aatgacgaggaggaggatgaagatcagtcatcctctgaggaatccagtgatttggactca
gattag
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integrated database retrieval system
