Kryptolebias marmoratus (mangrove rivulus): 108232086
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Entry
108232086 CDS
T05608
Symbol
tnnc1a
Name
(RefSeq) troponin C type 1a (slow)
KO
K05865
troponin C, slow skeletal and cardiac muscles
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04020
Calcium signaling pathway
kmr04260
Cardiac muscle contraction
kmr04261
Adrenergic signaling in cardiomyocytes
kmr04814
Motor proteins
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108232086 (tnnc1a)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108232086 (tnnc1a)
04820 Cytoskeleton in muscle cells
108232086 (tnnc1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108232086 (tnnc1a)
04261 Adrenergic signaling in cardiomyocytes
108232086 (tnnc1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108232086 (tnnc1a)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
108232086 (tnnc1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
SPARC_Ca_bdg
DUF1707
DUF5580_M
Dak2
EMG1
DUF5390
Motif
Other DBs
NCBI-GeneID:
108232086
NCBI-ProteinID:
XP_017265145
UniProt:
A0A3Q3AMM3
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All DBs
Position
LG8:complement(12348285..12354083)
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AA seq
161 aa
AA seq
DB search
MNDIYKAAVEQLTDEQKNEFKAAFDIFVQDAEDGCISTKELGKVMRMLGQNPTPEELQEM
IDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELAELFRMFDKNADGYIDLEELKMM
LESTGEAITEDDIEELMKDGDKNNDGKIDYDEFLEFMKGVE
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatctacaaagcagcggttgagcagctgacagatgaacagaaaaatgagttc
aaggccgcctttgacatcttcgtccaagatgcagaggatggctgcatcagcaccaaggag
ctggggaaggtgatgaggatgctgggtcagaaccccacaccggaggagctgcaggagatg
attgatgaagtggatgaagacgggagcggcacggtggacttcgacgagttcttggtcatg
atggtgcgatgcatgaaggacgacagcaaagggaagacagaggaagagctagcagagctg
tttcggatgtttgacaaaaacgcagacggttacatcgacctggaggagctgaaaatgatg
ctggaatccaccggcgaggccatcaccgaggacgacatcgaggagctgatgaaggacggg
gacaagaacaacgacggcaaaatcgactacgacgaatttttggagttcatgaaaggagtg
gagtaa
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integrated database retrieval system