Kryptolebias marmoratus (mangrove rivulus): 108232873
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Entry
108232873 CDS
T05608
Name
(RefSeq) vimentin A2
KO
K07606
vimentin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108232873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108232873
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108232873
04147 Exosome [BR:
kmr04147
]
108232873
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
108232873
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
108232873
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108232873
Exosomal proteins of other cancer cells
108232873
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
TolA_bind_tri
DUF1664
DUF948
TDP-43_C
ACCA
Golgin_A5
Trimer_CC
HALZ
FAD-depend_C
Motif
Other DBs
NCBI-GeneID:
108232873
NCBI-ProteinID:
XP_017266427
UniProt:
A0A3Q3EK56
LinkDB
All DBs
Position
LG20:7434475..7439638
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AA seq
460 aa
AA seq
DB search
MMSYRAAPQSSYRKMFGGDRAAVTRSSYSSRSYSSPPLRSSRVSFGLSSAPAVYAAKTQR
LRSSSAAMPRLASENLDFSLSDAINSEFITNRTNEKAQMQSLNDRFASYIEKVRFLEQQN
KILLAELEQLRGKGTTRVGDLYEDEMRELRRQVDQLTNEKARVEVHRDNLADDIQRLREK
LQDEMSQREEAEANMQSFRQDVDNAALARLDLERKIESLQEEINFLKKLHDEEMLELQSQ
AQQQQQHVQVDMEMAKPDLTAALRDVRLQYENLASKNIQESEDWYKSKFADLTEAAARNN
EALRLAKQEANDYRRQVQALTCEVDALKGTNESLERQMREMEENFSLENSGYQDTISRLE
EDIHNMKDEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISTPLPSFSSLNLREA
MVESKPHVESMTTKKVVIKTIETRDGQVINESTQNHEEME
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacagagcagctccacagtcttcctacagaaagatgttcggcggggaccga
gccgcggtgacccggagcagctactccagccgcagctactccagcccgccgctgcgctcc
tcccgggtctccttcgggctctcctccgcgccggccgtttacgcagcgaagacccagagg
ctccgcagcagcagcgcggccatgccccggctggcctccgagaacctggacttctccctg
tccgacgccatcaacagcgagttcatcacgaaccgcaccaacgagaaggcgcagatgcag
tcgctcaacgaccgcttcgccagctacatcgagaaggtgcgcttcttggagcagcagaac
aagatcctgctggcggagctggagcagctgcggggcaaaggcacgacccgggtcggagat
ctgtacgaggacgagatgcgggagctgcggcgccaggtggaccagctcaccaacgagaag
gcccgcgtggaggttcaccgggacaacctggcagatgacatccagaggctgagagagaag
ttgcaagatgaaatgtcccagcgagaggaggctgaggcaaacatgcaaagctttagacag
gatgtggataacgctgccctggccagactggacctggagcggaagatcgagtcgctccag
gaggaaattaatttcctcaagaagctgcatgatgaggaaatgctggagctgcagagccaa
gcccagcagcagcagcagcacgtgcaggtcgacatggagatggctaagcctgacctgact
gcggctctgcgggacgtacgtctgcagtacgagaacctggcctccaaaaacatccaggag
tctgaggattggtacaaatccaagtttgctgacctcaccgaagctgcagcccggaataat
gaagctttgagactagccaagcaggaggccaacgactacaggcgtcaagttcaggctctc
acttgtgaggtggatgccctcaaaggaactaacgagtctttggagcgacagatgagggag
atggaagagaacttctccctggagaacagtggctaccaggacaccatcagccgcctggag
gaggacatccataacatgaaggacgagatggcccgtcacctgcgagagtaccaggacctt
ctaaatgtcaaaatggccttggacattgagattgccacctacaggaagctcctggaagga
gaagagagccgaatctccaccccactgcctagcttctcctctctaaacctgagagaagca
atggttgagtctaaacctcatgttgaatccatgacaacaaagaaagttgtcatcaaaacc
attgagacgagggatggccaggtgatcaacgagtcaacccagaatcacgaggagatggag
taa
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