Kryptolebias marmoratus (mangrove rivulus): 108233014
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Entry
108233014 CDS
T05608
Symbol
si:rp71-17i16.4
Name
(RefSeq) troponin C, skeletal muscle isoform X2
KO
K12042
troponin C, skeletal muscle
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04020
Calcium signaling pathway
kmr04814
Motor proteins
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108233014 (si:rp71-17i16.4)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108233014 (si:rp71-17i16.4)
04820 Cytoskeleton in muscle cells
108233014 (si:rp71-17i16.4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108233014 (si:rp71-17i16.4)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
108233014 (si:rp71-17i16.4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
AIF-1
EF-hand_4
SPARC_Ca_bdg
EF-hand_11
p25-alpha
Motif
Other DBs
NCBI-GeneID:
108233014
NCBI-ProteinID:
XP_017266664
UniProt:
A0A3Q3A5J4
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Position
LG8:27229722..27236605
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AA seq
161 aa
AA seq
DB search
MPTDAQTDARSFLTEEMISEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPSREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRIFDKNGDGFVDREEFGDI
LHMTGEQVTEEDIDEMFGESDTNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgatgcccaaaccgacgctcgctccttcttaactgaggagatgatttcagag
ttcaaggctgcctttgacatgttcgacacagatggaggcggtgacatcagcactaaggag
ctgggtaccgtcatgaggatgctgggccagaatccgtccagagaggagttggacgccatc
attgaggaagtggatgaggatggcagcggcaccattgacttcgaggagttcttggtcatg
atggtccaacagctaaaggaggaccaggctggaaagagcgaagaagagctttcagaatgc
ttccgtatttttgacaagaacggagatggttttgttgaccgagaggaatttggagatatt
ctccatatgaccggagaacaagtcacggaggaagatattgatgagatgtttggagaatca
gacacaaacaaagacgggaaaattgattttgatgagtttctgaagatgatggaaaatgtc
cagtaa
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