Kryptolebias marmoratus (mangrove rivulus): 108238427
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Entry
108238427 CDS
T05608
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108238427 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108238427 (tprb)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108238427 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
108238427
NCBI-ProteinID:
XP_017275998
LinkDB
All DBs
Position
LG24:5033564..5052305
Genome browser
AA seq
2386 aa
AA seq
DB search
MAALLSQELEAPELSKLPKTIQSKLEKIISDRQYEIDSLKAQHEQFRVDSEQQFFEKADQ
LAQSQAELLSQTQKHLKLKDEFSKLSEELKSVRERNGECESAREKLSSEQTLLSKTKDEL
EAEKRELVRTLDRRSLEVEHLNDDLRQLNDKLVKVNTSKMALQMKLDELEAAEVNIKYKE
KRMEQEKELLHDQMSWLKNELKAKTEELLSLSRAKGNDILELKCTLENKEDELKKLQDQV
ASLRTSNEHHQKQNEEMISKLKEAKEQQANMEEKFRNELNANIKLSNLYKEAAADSEAKS
EELSRAVEELHKLLKDAGEANKVLEEKLQEMNGASDKTVSELKDRIQSLEKELDNANELL
SSSKLRGPVGAAVLSEEQMTTMSPTAATVSKIKPGMKLTELYTAYLESQEQLQLERLENK
RVNKYLDDIVQEVEAKAPILKRQRDEHERMQKSVASLSAKLEQAVKEVHRLQNEADEANK
RASLLERDNQRSELQLADLAQQVRVLLIELEEARGNHVLHEEEVSSADVSSTSEVISQHL
VTFRSVDELQKQNQRLLVALRELSDAQEKEEFQTTGNRRVELEQSLEKAQAELASLKEQR
NQQIKMTESIVRQRDMYRLLLAQATGVAFPQQGTPPEEFSLTSTPRRSPAATPTAGTPTA
LVSMGADSAEALEAKAALRQLQEVFSTYKTERSESEKAMTEQNEKLQEQLSDLRSQNAKI
STQLEFASKRYEMLQDNVEGYRKEIASLREKEQKMSAATQKLEQTVHTLNEDLKAAKEKL
SMTEGDAENLRKERDMLKLVESRLSQEKETNLSQQQSQNLLLTNLKTIQSTLERSETETR
QRLNSQLEKQEQLSLQLQKRLDQEVEQRRLFSRNQEMQLMEVKRQLETQVALNQKTKEQL
NAAELELNTLKMQQGSIETRHALSSPSTSIIRGLQGSDQDREELQGRLQLAETQAEELAE
SLKAVTSSMEQYKAMAKSLEESLEKEKQVTEEACSSVETCLKKSEEQHRLLEEKVQKTEE
EKQNMEKEKREALASLEKEIDDLKRRLSGAREDHQATQQQLAVAETQQQQALKDSQEQAK
LAAEAQDKYEQEMILHAADVEALQTAKAQALQAVELRHQLEEKVQRVGAELLEARVSWEE
QEKILKEEISKMESRHEELQKQNSLLHEQVQTMSSRLADSLQRASSESSLNVSLTEEGKS
EDQLLEILRFVRREKEIAESRFEMAQEESLRHRLRVAHLEQELKEAQDSLAAARERMQVT
AKTLAQHDELMKKTETMNILIETNKILREEKEKMAQELQKSQAKVQKLESDNLPLQEANF
ELSERSGMMQAEKTLLEEEVKRWKTRTQQLVSQQKDADPDELKRLHSEKDLHLKRIQQLS
EDTNRLNKELARTNEERNLMKKELETKNQEQGRLQSEREVHLKRIQQLIEEKNSMKKELE
TKNQELLEKMRTINQVKKIGRRYKTQYEELKVEHDKVTNAAAGPSQDEEARQASAQELQG
IKDSLSQAETRNKELEGQLQNINKVVVEREAEARSAQEQSSRLQTELTRVRQELQDKTSQ
EDTLKQQMAEKDEKTRKALLSAKQKISLLTSSKDQLQKENEELKQQQDELRQQREELEMR
VSALKSQYESRLSKQERGLRDLRAQQERQDQRDETPEAGPSKIQEQQRGTEQRQISLKTT
SAADRGSACTSEPPTANIKPTPVVASASKQPNNPSNKPTPRASIRPMITPAPVPTPTPTA
TVMPTTQVETQEAMQSAEGPPVEHVTVYGSASGSVRSASPNVQTTLASPMLTVQQIQTQA
TAFVQPTQQQSVTHPEPASQEPPPVVIEATPSSQVEWPSSFSSSSVFGTVSATPGTSALS
KRPREEEESSTVATDTEAAQEDTSRAPIPKKLRIIQRVGPEEEMLVEESAEAEGVVPTDS
QDGAEVSQTEEFSNLEEAEEAASSQSVSVELGVTPSLSETPDQLQHEVIVILTDSESDEE
HEEEEEEEEEQDYAEEEEEEDEEEEEEEEEDEEEDDGDMGEEGEDSNEGSGDGNEAYEAE
DTEGADVTDPGTETEESLGASDSTQRPADSQTPSFEGNTMEAFSTEQPITSSGTRMPQSP
RRPMHQLPPRLNIHPAPTSELGPPAQVHRIPVRRQSVGRLTPGVPSSAQHFFEEDDRMVP
STPTLIPPRSEGFDQAIHSPQVAGVPRFRFGPSEDLPQTSLSSHSDLGQLASQGGLGMYE
SPIFLATHEEESGGRSVPTTPLQAAPPVTAFSEVAQSDSSEHASQSVPMVSTSTPGLVSG
TASSGEERDIFLEPDTDRPGAEVSVDPGVSQGDTEEPSQPSDKASLPSTSQEPSSSSADT
SSAPPKPSRPGPSRQLQRWPDNRSGRMKRGGHAFPSRGVPGRRFMR
NT seq
7161 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcctgtcgcaggagctggaggctcccgagctatctaagctacctaaaaca
attcaaagcaaacttgaaaaaataatttcagatcgtcagtatgaaattgattcattgaaa
gcgcaacatgaacagtttcgggttgacagtgaacaacagttttttgaaaaagctgaccag
cttgctcagagtcaggcagagcttttgtcccaaactcaaaaacatcttaaactcaaagat
gagttcagcaaactcagtgaggagctgaaaagtgtccgcgagaggaatggggagtgtgaa
agtgcgcgagagaagttgtcatcagagcagactttgctctcaaagaccaaagacgaactg
gaggcagaaaagcgagaacttgttcgaacactggacaggagatccctggaagtggaacat
ttaaatgatgacttgaggcagctcaatgataagttagtgaaagtcaacacttctaagatg
gctctgcagatgaagttagatgagcttgaagcagcagaagtaaacataaaatacaaagag
aagcgtatggaacaagaaaaggagctgctacatgaccagatgtcttggttgaaaaacgag
ctgaaggccaagacagaagaactgctgtctttgtcccgggcgaaggggaatgacatcctg
gagctaaaatgcaccctggagaataaagaagatgagttaaagaaactccaagaccaagtg
gcgagtttgaggacttcaaatgaacaccatcagaaacaaaatgaggagatgatcagcaaa
ctaaaagaagccaaggagcaacaggccaacatggaggagaagtttagaaacgagctgaat
gccaacatcaagctttccaatttatacaaggaagcagcagcagattctgaggcaaagagt
gaggagctgagtcgggcagtggaggaactgcataagctgctgaaagatgctggagaagcc
aacaaggttcttgaagagaagctgcaggaaatgaatggtgcatcagataaaactgttagt
gaattaaaggacaggattcagagtcttgaaaaagagctggacaacgccaatgaactgctc
tcaagttctaaacttagaggtcctgttggtgcggctgtgctgtctgaggagcaaatgaca
acaatgtctccaacagcagcaactgtgtccaaaataaaacctggcatgaagctgactgag
ttgtacacagcgtatttggagagccaggagcagctgcagttggagcgattggagaataaa
cgggtcaacaagtatctagatgacattgtgcaggaagtagaagctaaagccccgatcctc
aaacgacaaagggatgagcatgagcgcatgcagaagtctgtggccagtctttctgccaaa
ctggagcaggctgttaaggaggtgcaccgtctgcagaatgaggctgatgaagccaacaaa
cgtgcttctctcctggaaagagacaaccagaggtctgaactccagctcgctgatttggct
caacaggtccgtgtgctgctgatcgagctggaagaggctcgtggaaaccatgtgcttcat
gaagaagaggtgagctctgctgacgtcagcagcacatccgaggtgatcagccaacacttg
gtaaccttccgcagcgtggacgagcttcagaagcaaaaccagcgtcttctggtggctctc
agggagctcagtgatgcccaagaaaaagaggagtttcagaccacaggcaacaggcgtgtg
gagctggagcagagtctggagaaagctcaggctgagctggcgtctctgaaggagcaacgc
aaccagcagataaagatgaccgagtctattgtgaggcagagggacatgtaccgtttgctg
ctggctcaggccaccggagttgccttccctcaacaaggaacaccacctgaggagttctcc
ctgacatctacccctcgacgttcaccagcagccactcccaccgcagggacacccactgca
ctagtctccatgggtgcagactctgctgaagcgctcgaggccaaagcagctttgcgacag
ttgcaggaagtgttctccacctataagacggagcgttcggagagtgaaaaggcgatgacc
gaacagaacgagaagctccaggagcagctgtctgatctccgctctcagaatgccaagatt
tccactcagctggagtttgcctcaaagaggtatgagatgctgcaggacaacgtcgagggc
tacaggaaggagatcgcctcacttagagaaaaagaacagaagatgtctgctgccacgcag
aaactggagcagactgttcatactctgaacgaggacctgaaagctgccaaggagaaactc
agcatgactgagggtgatgctgagaaccttcgcaaggagagagacatgctgaagctggtg
gagtccaggttaagtcaggagaaagagacgaatctgagtcaacagcagagccagaacctg
ctgctgaccaatctaaagactattcagtccactcttgagcgttcagagaccgaaacacgt
cagcgtctcaacagccagctagaaaagcaggaacagctgagcctccagctacagaagagg
cttgatcaggaagtggaacagcgccgcctgttcagcagaaaccaggaaatgcagttaatg
gaagtaaagaggcagttggagacacaagttgctttaaatcagaaaaccaaggagcaactg
aatgctgcggagttggagctcaacaccctcaagatgcagcagggcagcattgaaacacgc
cacgccctgagctcaccatctacatccatcatcagaggtctgcagggttcagaccaagac
cgagaggagctccaaggccgcctgcagctggccgaaacccaggcagaggagctggcagag
agccttaaggccgtcacctccagcatggagcaatacaaagccatggctaaaagcctggag
gagtctctggaaaaagagaaacaggtaacggaggaggcctgctcatctgtggagacctgc
ttgaagaaatctgaggagcagcatcgcctgctggaggagaaggtccagaaaacagaggaa
gaaaagcagaacatggagaaggagaaaagggaagctctggcctctctggagaaggagatt
gatgacctgaagagacgtctgagcggtgcccgggaggatcaccaggcgacgcagcagcag
ctggctgtagctgaaactcagcagcagcaggctctgaaggacagccaggagcaggctaag
ctggcagctgaagcccaagataaatatgagcaggagatgattctgcacgcagctgatgtg
gaggctctgcagaccgccaaggctcaggctctgcaggccgtcgagctcagacatcagcta
gaggagaaagtccagcgagtcggagctgaattactggaggccagggtctcctgggaggaa
caggaaaagatcctcaaggaggagatttccaagatggaaagtcggcacgaggagctgcag
aaacagaacagcctcctgcatgagcaggttcagacaatgagcagcagactggctgacagt
ctgcagcgggcctccagtgagagttcactgaatgtatctttgactgaagagggaaaatct
gaggaccagctgcttgagatcctcaggtttgttcgtcgagaaaaggagattgcagaatct
cgttttgagatggcccaagaggaaagtttacgtcaccgtttgagagtggcacacttggaa
caagagctcaaggaggcgcaggacagtttggctgctgcaagggaacggatgcaggtgact
gcaaagaccctggctcagcatgatgagctgatgaagaagactgaaaccatgaacatcctg
atagagaccaacaagatactgagagaggagaaagagaagatggcacaagaactgcagaag
agccaagctaaggtgcaaaagctggagtcggataatttgccgcttcaggaggctaacttt
gagctgagtgagagaagtggcatgatgcaggccgagaagacgttattagaagaggaagtg
aagcgctggaagactcgaacccagcagttggtgagtcaacagaaggatgcagatcctgat
gagctcaagcgtcttcattctgagaaggatttacatcttaaacgcatccagcagctcagt
gaagacaccaataggcttaataaagagttggccaggacaaatgaggagaggaatttgatg
aagaaggaattggaaactaagaaccaggaacagggtcgtctgcagtctgagagggaagta
catcttaaacgtatccagcagctcattgaagagaagaattcgatgaagaaggaattggaa
actaagaaccaggaactcctggagaagatgcgaaccatcaaccaggttaagaaaatcgga
cgacgctacaagactcagtatgaggagcttaaagtggaacatgacaaggtgacaaatgcc
gcagcaggtccatcccaggacgaggaggcacgtcaggcctcggctcaagaactgcagggc
attaaagattctctgagccaggctgaaaccaggaacaaagagctggaaggacagctccag
aacatcaacaaggtggtcgtggagcgagaggctgaagcccgcagtgctcaggagcagtct
tccaggctgcagacagagctgacgagggtgcggcaggagctgcaggataaaacttctcag
gaggacactctgaaacagcagatggccgagaaggacgagaaaaccaggaaggctcttctt
agcgccaagcagaaaatcagcctcctcacaagctccaaggaccagctgcagaaggaaaat
gaagaattgaagcagcagcaggatgaattgaggcagcagcgggaggaactggagatgcga
gtgagcgctctcaagtctcagtatgagagccgtctcagtaaacaggagcgaggcctcaga
gaccttcgagctcaacaggagagacaggaccagagagacgagacacctgaggcaggtcca
agcaagatccaagagcagcagaggggcacagagcagagacagatcagtttgaagaccacc
tcggctgcagacaggggcagcgcctgcacctctgagccgccgactgccaacatcaagccg
acacctgtagtcgcttcagcgagcaaacagcccaacaacccgagtaacaaacccactcca
cgagcgagcatcaggcccatgatcacgccggctccggtgcccacgccaacaccgactgcc
accgtcatgccgaccacacaggtggagacacaggaagccatgcagtcagctgaaggtcca
ccggtggagcatgtgacggtgtacggcagcgccagcggctccgtgcgctccgccagcccg
aacgtccagaccacactagcgagccccatgctgaccgttcagcagatccagacgcaggcc
acggcttttgttcagccaacacagcaacagagcgtgacccacccagagccagccagtcag
gagccgccgcctgtcgtgatcgaagctacgcccagttctcaggtggagtggccttcatcg
ttctcctcctcgtctgtgtttggcacagtttcagcaacacctggaacctccgctttgtcc
aagaggcctcgtgaagaagaagaaagcagcactgtggccaccgacactgaagcagctcag
gaggacacttccagggctcccatacctaaaaagctgcgcatcatccaaagagtgggcccg
gaggaggagatgctggttgaggagagtgctgaggctgagggggtggtgccaacggacagt
caagatggtgcagaggtcagccagacagaagagttttcaaacctggaggaagcagaagaa
gctgcatcctctcagtctgtctcggtggagcttggagtcacaccaagtcttagcgaaacc
cctgaccaactgcagcatgaagttatcgtcatactaactgacagtgagagtgacgaagaa
cacgaagaggaggaggaagaggaagaagagcaggactacgcagaggaggaggaagaggaa
gatgaggaagaggaggaggaggaagaggaagatgaggaagaggatgatggtgatatgggg
gaggaaggagaggacagtaatgaggggagtggagatggcaacgaggcttatgaagcagag
gacacagagggagctgatgtaacagacccgggcactgagacagaggagagtctgggggcg
tctgactccacccagaggcctgcagattcccagacacccagctttgaggggaacacaatg
gaggccttctcgacagaacaaccaatcaccagttctggtacccggatgccccagtcacca
cggagacctatgcatcagctgccgccccgactgaacatccaccccgcgccgacatcagag
ctgggacctcctgctcaggttcatcgtatccctgttcggcgccagtcggtgggcagactc
actcctggagttcccagcagtgctcaacacttcttcgaagaagatgacaggatggttccc
agcactcccactctgattcctcctcgttcggagggttttgaccaagccattcattccccc
caggttgcaggtgtacctcgcttcaggtttggcccttcagaggacctcccacagaccagc
ttatcctcacattctgacctgggacagctcgcttcacaaggaggtcttgggatgtatgaa
agtcccattttcctagcaactcacgaggaggagtcaggtggacgcagcgttcccaccact
ccactacaagctgcaccaccagtcacggccttctcagaggtcgcccagtccgactcgtcg
gagcatgcctcccagtcggtccccatggtgagcacatcaacaccgggcctcgtgtcggga
acagccagttcaggagaggagagagacatcttcctggagccagacactgacaggcccggt
gctgaagtatctgtggatcctggggtgtcacagggagacacagaggagccaagtcaacca
tctgacaaggccagccttccctccaccagccaggagccttcttctagttctgcagataca
agcagcgctccacccaaaccctcccgacccggacccagcagacagctgcagcgctggcca
gacaaccgctcaggacgcatgaagagaggaggtcacgcctttccttcccggggtgtacct
ggaagaagatttatgagatga
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integrated database retrieval system
