Kryptolebias marmoratus (mangrove rivulus): 108240950
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Entry
108240950 CDS
T05608
Symbol
smc4
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108240950 (smc4)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
108240950 (smc4)
Condensin II
108240950 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
TPR_MLP1_2
AAA_29
HIP1_clath_bdg
APG6_N
Crescentin
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108240950
NCBI-ProteinID:
XP_024863488
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All DBs
Position
LG2:11018156..11035002
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AA seq
1301 aa
AA seq
DB search
MPSKTAKSSTASSSSSKPTGRGLQPRDDSEDGLDVPPPEPGSGGQEEEEAPPTTADPSLG
EAAGAADNRSLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQTLGPFHKR
FSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDQHKDVQSCSVEVHFQKI
IDKEGDDYEVIPNSKFCVSRTANKDNSSAYYINGKKATFKEVGALLRSHGIDLDHNRFLI
LQGEVEQIAMMKPKGQTEHDEGMLEYLEDLIGXKEPIQTLGRCIELLNEQRGEKLNRVKL
VEKEKNALEGEKNKAVDFLTLENDIFKHKSHLYQYYVHDLQKRVVEKEQEKQKIMEDTKE
LTEKTAKISQEMEKMNQELKNVEKKQNKINKYIETQKEKFTQLDLQDVEVREKIKHSKSK
NKALQKQLEKDQKKLEEVRSVPASSEEAISEATARKEDLEKQKAKEEEKLKEVMESLKEE
TSGLQQDKEKKEKELMELSKAVNETRSRMDLAQSELDIYLSRHKTAVTQLNTAKQTLQTA
TETLQERRAAIKDLQVTIPQKEQELKKDQEELEKLTKVDTETKEIVRELRQKVDEAKSSL
SSNRSRGKVLGALMQLKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCGALDNIVVDTIDT
AQKCVTFLKEQNIGVATFIGLDKMKVWEKNMAPIRTPEDSPRLFDMVQVNDEKVRPAFYF
ALRDSLVARDMEQATRMAFQKDRRWRVVTLKGQIIEMAGTMTGGGRVMKGRMGSSISAEV
SQVELDRMESKLNEKVSRLQSCQERKLQLEENIQRLQPQLREMKNTLEKYTNSMSSLADQ
ETHLKLQIKELEANVLAAAPDKAKQKQMEKSLEAFKKDYESASSKAGKVENEVKRLHNLI
VDINSHKLKAQQDKLDEVNKELDDCSSIITKAKVAIKTADRNLKKCEESIARVQGELEEN
GKLMAELTEQLKKLEDEAGEIMKACHEAEAALPEVQEQYQAVTKEIKILQQQEHALQEES
LNVRLSIEHIDALITKHNGKIKYWQDEAAKLSLHTIDGQPAEELRALPPAELEAISDPNV
IVDKMSTLEVQCGQIKPNLGAIAEYKKKEELYLQRVAQLDEITTERDRFKRAYEDLRKQR
LNEFMTGFNIITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNL
SGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYDQTKNAQFIIISL
RNNMFEIADRLIGIYKTHNTTKSVGINPKTIAFKETEAVSA
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcgaagagctccaccgcctcctcctcctcctccaagccaacaggg
agagggttgcagccccgggatgactccgaggacgggctggatgtacccccaccagaaccc
gggtccggcggccaagaggaggaggaggcaccgccgacaactgctgatccgtccctgggg
gaggctgccggggcggctgataaccgaagcttggaggagattctcggcagcatccctcca
cccccgcccccagcaatgaccaatgaacccggcgctccccgcctcatgatcacgcactta
gtgaatcgcaactttaagtcgtacgcgggcgagcagactctcgggcctttccacaagcga
ttttcctgcatcatcggtcccaatggaagtggaaagtccaacgtgatagattcgatgctg
tttgtgtttggatacagagcccaaaagatcagatcgaaaaagctctccgtgctgatccac
agctctgatcaacacaaagatgtgcaaagctgctctgtggaggttcattttcaaaagatt
attgataaggaaggagatgactacgaagtcatccccaacagcaagttctgcgtctccagg
actgccaacaaagacaattcctcagcctactatatcaatggcaagaaagccacattcaaa
gaagtgggggctttactccgaagccacggtattgacctagaccacaacagatttcttatc
ttacagggcgaggtggagcagatcgccatgatgaagcctaaaggccaaacggagcacgac
gaggggatgctggagtacttggaggacctcatcggcntcaaggagccgatccaaactctg
ggtcgctgcatcgagcttctgaacgagcagagaggagagaagctgaacagagtgaagctg
gtggaaaaggaaaagaacgctttggaaggagaaaagaacaaagctgtggacttcctaacc
ttggagaacgatatctttaaacacaagagtcacctttaccaatattatgttcacgatctg
cagaaacgtgtggtggagaaggagcaggaaaagcagaagatcatggaggacaccaaggag
ctcacagagaaaactgcaaaaatctctcaagaaatggaaaaaatgaatcaagagctcaaa
aatgtagagaaaaaacaaaataagatcaacaagtacattgagacccagaaggaaaagttc
acccagctggacctgcaggatgttgaagtgcgtgagaagattaaacactccaagagcaag
aacaaggcactgcagaagcagctggaaaaagaccaaaaaaagctggaggaagtgcgcagc
gtaccagccagcagcgaagaagccatctctgaggcgacagcccgcaaggaagacctggag
aaacagaaggccaaagaagaagagaaactgaaggaagtgatggaaagtctgaaagaggaa
accagcggcttgcagcaggacaaagagaaaaaagagaaggagctcatggaactcagcaag
gctgtgaatgagacccgttctcgtatggatctcgcccagtctgagctcgacatctatctt
agccgccacaaaacggcagtgacgcagctcaacacggccaaacagacgcttcagacagca
accgagacactgcaggaacgccgtgccgccattaaagacctgcaagtcacaatcccccag
aaggagcaggaactcaagaaggaccaggaggagctggagaagctgacgaaggtggatacc
gagaccaaagagatagtgagagaactgaggcagaaggtggatgaagccaagagctctctg
tcctccaatcgcagtcgaggaaaagtcctgggcgctttaatgcagctgaagaagagcggc
agaattcctggcatctatggaagattgggagaccttggagccatagatgagaagtacgat
gtggccatttcctcttgttgtggcgctctggacaacattgtagtggacaccattgacacg
gctcagaaatgcgtcactttccttaaagaacagaacatcggggtcgccactttcatcggc
ctggacaagatgaaagtgtgggagaagaacatggctcccattcgcactccagaggacagc
cctcgcctgtttgacatggtgcaggtgaacgacgagaaggtgcgcccggccttctacttt
gccctgagggactcgctcgtagccagagacatggagcaggccaccaggatggccttccag
aaagacaggcgctggagggtggtcaccctgaagggacagatcatcgagatggctggaacc
atgaccggaggaggaagagtgatgaaaggcagaatgggttcttccatcagtgctgaggtc
tcccaggtggagcttgatcgtatggagagcaagctgaacgagaaagtgtcacggctgcag
agctgccaagagagaaagctgcagctggaggagaacatccagcgcctgcagccgcagctc
agagagatgaagaacaccctggaaaaatacaccaacagcatgagtagtttagctgaccag
gagactcacttgaaacttcagattaaggagcttgaagccaacgtgctggcagctgcccca
gacaaggccaaacagaaacagatggagaagagcctggaggcgttcaaaaaagactatgag
tcagcgtccagtaaggctgggaaggtggaaaatgaggtgaaacgactccacaacttgatt
gtagacatcaacagccacaagctgaaggctcagcaggacaaactggacgaggtcaacaag
gagctggacgactgctcctccatcataaccaaggccaaagtggccataaagacagctgat
cgaaacctgaagaagtgtgaggagagtatcgctcgggttcaaggtgagctggaggagaat
gggaagctgatggctgagctcacagaacagctgaaaaaactggaagacgaggccggggag
atcatgaaggcctgtcacgaggcagaggctgccctgccagaggttcaggagcagtatcag
gccgtgaccaaagaaatcaagatcctgcagcaacaggaacacgcgctgcaggaagagtcc
ctcaacgtgcgcctgtccatcgagcacatcgacgccctcatcacgaagcacaacggaaag
atcaagtactggcaggatgaggctgcaaagctttcccttcacaccatcgacggccagcca
gcggaggagctgcgtgcgcttcctcccgctgagctcgaagccatctctgatcccaacgtc
atcgtcgacaagatgagcaccctggaggtccagtgtggtcagatcaaacccaacctgggg
gccatcgccgagtacaagaagaaggaggagctgtacctgcagcgcgtcgctcagctggat
gaaatcaccacagagcgggacagattcaaacgtgcctacgaggatctgcgcaagcagcgg
ctcaacgagttcatgaccggcttcaacatcatcaccaacaagctgaaggagaactaccag
atgctgacgctgggcggagacgcggagctggagctcgtggacagcctggaccccttctcc
gagggcatcatgttcagcgttcgtcctcctaagaaaagctggaaaaagatctttaacctg
tcgggaggagagaagaccctcagctccctggctctggtgttcgctctgcaccactacaag
cccacgccgctctacttcatggacgagatcgacgccgctctggatttcaagaacgtctcc
atcgtggcctgttacatatacgaccagacaaagaacgctcagttcatcatcatctccctg
aggaacaacatgttcgagatcgcagatcgcctcatcggcatctacaaaacgcacaacacc
accaagagcgtcgggatcaaccctaaaaccatcgccttcaaagagaccgaagcagtctct
gcgtga
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