Kryptolebias marmoratus (mangrove rivulus): 108241786
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Entry
108241786 CDS
T05608
Symbol
pnn
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108241786 (pnn)
03015 mRNA surveillance pathway
108241786 (pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108241786 (pnn)
03041 Spliceosome [BR:
kmr03041
]
108241786 (pnn)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108241786 (pnn)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108241786 (pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
108241786
NCBI-ProteinID:
XP_017281697
UniProt:
A0A3Q3A2F6
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Position
LG10:complement(19371346..19375927)
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AA seq
700 aa
AA seq
DB search
MAVVVRSLQDQLEKAKESLKNVDDNIRKLTGRDPNDSRPGQIRRLSGPMAGLGGGGGGRG
RGINLLRRSLSDMGSGGPPAKQRDIEGALLRLAGDQRARRDVRHDSDAEDDDDVKKPALQ
SSVVATSKERTRRDLIQDQTMDEKGKQRNRRMFGLLMGTLQKFKQESNVSSEKLKRRSEI
EQKLEVQAEAERKKVENEKRELFEERRAKQTELRLLEQKVELAQLQEEWTSHNNHLLKFI
RTKTKPHIFYRPGKMCSATQKLLEESTKKLNAVFEERREAFAEHLNKMELRPRRQLNRDQ
DSSTASRMDHLTEGKPAGQVDKRTGKRGHAGMEEDDEEDEDEEDEKEKEGARKEAEQGGD
GEEREEGEKEGLKKIEEEEEGMEVSEEGREEKEGEQQETGENQKEKAEKKASPESEEMEM
EVEEKADKDDEGREEEVEPVSQQGPTEPQDVTAPNTQTSEAAVSNQESANIYQNQDTPAA
GEPAAQSPVIEGASPAPVPQTASAPPAQESITTVQDYIIPAQDFTSPVQDSTDEKQPVEV
KSVEEAPEKLPDAQEASIITPAKEGEDGGRGRKGEKEPRKRRSRSNSSSSSSSGSSSSGS
SSSSSGSSHSSSSSSSSSSSSSNSSSRSRSRDSGKRKRRAPDRNRDKKKEDERSHHKRGG
SSGGGRDSKERRKRRSEEGKGRSSRSDREHKDRDRKDKRR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtagtgcggagcttgcaagatcagctcgaaaaagccaaagaaagcttgaaa
aatgtggacgataatattcggaaactgaccggacgagatccaaatgattccagaccgggt
cagatccgtcggctcagcggccccatggcaggcctgggaggaggaggaggaggtagaggc
agaggaatcaacctgctcaggcgtagtctctcagatatggggagcggcggccctcctgcc
aagcagagggacattgaaggagccctgctgaggctggcaggagatcagagggccaggaga
gacgtacgtcacgacagcgacgccgaggatgatgacgatgtcaaaaaaccggcgttgcag
tcgtctgttgtagctacctccaaggagagaacacgccgagatctcatccaggatcaaact
atggatgaaaagggcaaacagaggaatcggcgcatgtttggcttgctgatggggacgctg
cagaaatttaagcaggaatcaaacgtctcttcagagaagctgaagcgacgttcagagatt
gagcagaagctcgaggttcaagctgaggctgagagaaagaaggtggaaaatgaaaagaga
gagctgtttgaagagaggagagccaagcagacagagttgagactgctggaacagaaagtg
gaattagctcagctgcaagaggagtggaccagccacaataaccacttgctaaaatttatt
cgtacaaagaccaagcctcatatcttctaccggcctggcaaaatgtgctccgcaacacag
aaactcctcgaagaatccaccaagaaactaaatgctgtgtttgaggagagacgcgaggcg
tttgcagaacacctcaacaagatggaactgcgtccgcggcgacagctgaaccgcgaccag
gacagcagcacagcctcaaggatggaccacctgacggagggtaagccagcaggtcaggta
gacaagcgaacaggtaaaaggggtcatgcagggatggaggaagatgatgaggaagatgag
gacgaggaggatgaaaaggaaaaagagggggctagaaaggaggcagaacagggaggagat
ggggaggaaagggaagaaggggagaaggaagggttgaagaagatagaagaggaggaggaa
gggatggaggtgagtgaggagggaagagaggagaaggaaggagaacaacaggagacagga
gaaaaccagaaggagaaagcagaaaagaaggcaagtccagagtcagaggagatggagatg
gaggttgaggagaaggcagacaaggatgatgagggcagagaggaagaggtagaaccagtc
agtcagcaggggcccacagagcctcaggatgtaacagctccaaacacccagacgtctgaa
gcagctgtcagcaaccaggaatcagcaaacatctatcagaaccaagacacccccgctgca
ggagaaccagcagcacagtcccctgtgatagaaggggcttctccagccccagtaccccaa
acagcttctgccccccctgctcaggagtccatcactactgtccaggattacatcatccct
gcacaggatttcacctctcctgtccaggactccacagatgagaagcagccggttgaagtg
aaatctgtggaggaggccccagaaaagctgcccgatgctcaggaggcctctataattact
cctgcaaaggagggggaggacggaggcagggggaggaagggggagaaagaaccgcggaag
cgccgcagtcgtagtaacagctcctcctcttcctcctccggatcctcctccagcggtagt
tcttcctcgtcctctggatccagccactcctcatcgtcgtcctcgtcttcctcgtcctcg
tcgtccaacagcagcagccgaagccgcagccgagacagcggcaagcgaaagagacgggcg
ccagatagaaacagagacaagaagaaggaggacgaaagaagtcaccataagagaggaggg
agtagcggaggagggagagactcgaaggagaggaggaagagaaggagcgaggaagggaag
ggcaggtcttcccggagtgatagggagcataaagatagagacaggaaggacaaaagacgc
tga
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