Kryptolebias marmoratus (mangrove rivulus): 108242852
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Entry
108242852 CDS
T05608
Symbol
rpgrip1
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108242852 (rpgrip1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108242852 (rpgrip1)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108242852 (rpgrip1)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
MKS complex
108242852 (rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
Motif
Other DBs
NCBI-GeneID:
108242852
NCBI-ProteinID:
XP_017283472
LinkDB
All DBs
Position
LG7:complement(4953130..4965208)
Genome browser
AA seq
1355 aa
AA seq
DB search
MSPVVDETAGDLPVRDVGLMRAGLMPAAPDTLREGKALKKHRAMKTKADPQRLFRFPREH
LEDLCLRLQEENSVLRHHTRTQDQRLRRMSTRLMRLRQTRPGSSAVKERDMEDTVQELEA
RVAMLESQKEVLQNKLSLAKQHIVDLGARSPYKYSKGKNVEGEAGVRRAAQTAPPRYGVT
SEDTRAEMERFRSSLTDQVRMTELELTAQALRDTLREKEVEVEGTIRELRKQQADRHRTT
IRENVDLIRLQKQLSEKSAALRVSQEKFNDLQEAYENQLEETQRSLKESQGALLEKVEEL
TEQLKQERQKALTLDGQLTTMTLSLQTLDKLQERISDLEGERDLIKENYDSLLISTLSAQ
SNNDNQAEKLRDVEQKKEKLVENIFSEEIQRLEEMLQAEREERGKLELEKEKLRQEKETL
EEQRGREEESSVLMKERQERLEQEAVQYKQQVSTLQDRLNAISKEFDLSIEELSETLLQI
KAFRMQQESREDLRFLVADGKVEDSTRELINIQASYAETALELQKTRNLLLLEHKITKDL
QEELNTVNQKMERDKEESRRRMAEKDKLLAKRALQINTLQAQLKELAYSPRNYKRTIPIQ
YTWPAGDQEVVQPIEDDLCFSQLKTGESLLEIHLKAATFTPTGLCIMSNIHPGADKNENI
VTFCTYCLLDFEMHSTPLVSGSQPNYGFTSRYALTARDLGRLGGQGSRVRVELHQALGGV
RFVTHGSGHMSLMGAMERRGERIGGGVNITGHEGEIIGVVDFWVRLFPPAEPIGTVTENG
AERRTVTQRSPVQTLLGWQDTVHEELHDYGSGIPNELVVMLERCVGLNARWPGLLPDAYL
TYRLYDLPPHTSQTVQCAADPVFNDVTSYPLAVAPDVLNYFRSSSLWVYVFDDSDDQIPP
AYLAKTPIPLRALATGREIRGDYVLRDPAGGPRGMVRVMLKWKYPFQPPVDALQGRQERG
VEEQGRAMRSSQREERRREEGSHRPIAKPRVKTRQLDGRETKSVQKETKGWPQPALVKQQ
SSQDVRSEHVTSVKPLDTRLSADRRRSSRRSTEVCQRTPHRTLKPRQKTLSHKSSVSRLS
LTTASRGNSVSDAGIQDVPSVDQVSVFEAGEEEEKRSESEDSEAPESSESTQSDVIIIPP
KRRIKKGDKLRVEILSLTFEPSSHVALDQSVQRVYVEYRLLGVPMETTETPMSLRKPLEG
EEIHYNFTRVIYVDGSQSAPLRQYLYTMLEGTDPNQGRLKFTVVSEPIDDDEECVDVGHA
FLDLQELLLTGNDVNEQQIEIVSVDEDQEVIGHLKVSLEAAKALTGIYKEFHRKDGRKTE
ERTGEEEEEEKGKLEKKKKTDHIQVLDYDDDSVFY
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagttgtggacgagacagccggggacctcccagtcagagatgtgggactgatg
agggcagggctgatgccagcggccccagatactctacgtgagggcaaggcattgaagaag
catcgtgccatgaaaacaaaagccgaccctcagcggttgtttcgatttcccagggagcac
ctggaggacctgtgcctccgactgcaggaggagaacagcgtgctcagacatcacactcga
acacaggaccagaggctgcgcaggatgtccacacggctgatgcgtcttcgtcagacccgt
cctggctccagtgctgtcaaggagagggacatggaggacacagtgcaggagctggaggcc
cgggtggcgatgctggagagtcagaaagaagtgctgcagaataaactcagcttagccaag
cagcacattgtggacttaggggctcgcagtccttacaaatacagcaaaggtaaaaatgtg
gagggggaggctggggtcaggagggctgcacagactgctcccccacgctacggcgtcaca
tcggaggacaccagggcagagatggagagattcaggtccagtttgacagaccaggtgagg
atgacagaacttgagctgacggctcaggcactcagagacacgctgagagagaaagaggtg
gaggtggagggaacgattagagagctgaggaagcagcaggctgacagacacagaacgact
atcagagagaatgtggatctaatccgtctacaaaagcagctctcagaaaaaagtgcagcc
ctcagagtcagccaagagaagttcaacgacctgcaagaggcatacgagaatcagcttgag
gagactcagaggtcgctgaaggaaagccaaggagctctgctggagaaagtggaggagttg
actgaacagctgaagcaggaaagacagaaagctttgacgctggacggacagcttaccacc
atgactctgtctctacagaccctcgacaagctccaagagaggatatcagatctggaagga
gagagagatctgattaaagaaaattatgacagtctactgataagtactttatctgcccaa
agcaacaatgacaaccaggctgaaaagctcagggatgtggagcagaagaaggagaagctg
gtggaaaacatcttcagtgaggaaattcagagactggaggaaatgctgcaagcagagagg
gaggagaggggcaagctggagctggagaaggagaaactgagacaggagaaggagacgctt
gaggagcagaggggacgagaggaagagtcgtctgtgttgatgaaagagaggcaggagcgc
ctggaacaagaggcagtccagtacaaacagcaggtctcgactctgcaggacagactgaat
gctatttctaaggagttcgacctgagcattgaggagctcagcgaaactcttttgcagatc
aaggccttcaggatgcagcaggagagcagggaggacctgcgcttccttgtggccgacggg
aaggtggaagattcaacccgtgagctcataaatatccaggcttcttatgccgaaactgcg
ctcgagctacagaaaaccagaaacctcctgctgctggagcacaaaattaccaaagacctg
caggaagagttaaatacagtcaaccagaagatggaaagagacaaggaagagagcaggagg
agaatggcagagaaagacaaacttctagctaaaagagctcttcagatcaacactttacaa
gctcagttaaaagagttggcgtatagccccagaaactacaaacgaaccataccgatacag
tacacctggccagcaggagaccaggaagtggtccagcccatcgaggatgatctgtgtttc
tctcagctaaagactggagagtcactgttggagatccacctaaaggctgccaccttcacc
cccacagggctctgcatcatgagtaacatccatccaggagcggacaaaaatgaaaatatc
gtgaccttctgcacctactgcctgttggactttgagatgcactctactcccctcgtgtca
ggaagtcaaccgaactacggctttacatcacgctacgccctgacagcccgcgatctgggc
aggctgggaggtcaagggtcaagagtgcgagtggagctccaccaggcattagggggagtc
cggtttgtcacccatggaagtggacacatgtccctcatgggcgccatggagaggagagga
gagcgaatcggtggaggtgtcaatatcactggtcatgagggtgaaattattggtgttgtg
gatttctgggtgcgcctgttccctcctgcagaacccattggtaccgtgacagagaacgga
gctgaaaggagaacagtaactcagaggagtccagttcagactctgctgggctggcaagac
accgttcatgaggagttgcatgattatggtagtgggatccccaatgagctggtggtgatg
ctggagcgctgtgtgggactgaacgctcgctggccgggactacttcctgacgcctacctg
acgtacaggttgtacgacctgccacctcacacctcgcaaaccgtccagtgtgcagccgat
ccggtgttcaacgacgtcaccagctaccctctggcagttgcacccgatgtgctgaactac
ttcaggtccagcagtctgtgggtgtatgtttttgatgacagcgatgatcagataccacca
gcctacctggccaagactccaatccctctgcgagctttggccacaggcagagagatcaga
ggtgattatgtcctgagggatccagctggtggacctcgggggatggtcagagtcatgctg
aaatggaagtacccctttcagccgccggtggatgctctgcaggggagacaggagagggga
gtggaggagcagggcagagcgatgagaagctctcagagggaggagagaagaagagaagaa
ggatcacatagacccatagcaaagccaagagtgaagactcgacaacttgatggcagagag
accaaatctgtgcagaaagagacaaaaggctggcctcagcctgcacttgtaaaacagcaa
agctcacaggacgtacgatcagagcacgtcacctctgtgaaacctctggatactcgtctg
tcagcagacaggaggagatccagcaggaggtcaacagaagtgtgtcagagaacacctcac
cggacgctgaagccaagacagaaaacactctctcacaagtcttcagtatccagactatca
ctcaccacagcgtcaaggggaaattctgtcagtgatgctgggattcaggatgttccctcc
gtggatcaggtgtccgtgtttgaagcaggggaagaagaagaaaagaggagtgagagtgaa
gacagtgaagcccctgaatcttcagagtccacacaaagcgacgttattatcatacctcca
aagcgaagaattaagaagggagacaagctaagagtggaaattctgtccctgacgtttgaa
ccatcctcccacgtggcgttggaccagtcggtgcagcgtgtatacgtggaatatcggctg
ctgggcgttcctatggagacgacagaaacacctatgtcccttcgtaagccactggaaggc
gaggagattcactacaacttcacacgagtgatttatgtggacggctcacagtcagctcct
ctcagacagtatctgtacaccatgttggagggcacggacccaaaccagggcaggttaaag
ttcacggtagtcagcgagccgattgacgacgatgaagagtgtgtggacgtcggacatgct
ttcctggacctacaggaactgctgctcacaggaaatgatgtcaacgaacaacaaattgaa
atcgtgagtgtggatgaagaccaggaggtgataggacatctgaaggtgtcactggaagca
gctaaagccctgactgggatatacaaggagtttcaccgaaaagatggtagaaaaacagag
gaaaggacaggagaggaagaggaagaggaaaaaggaaaacttgagaagaagaagaaaaca
gatcatatacaagtgctagattatgatgatgacagtgttttctattaa
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