Kryptolebias marmoratus (mangrove rivulus): 108243520
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Entry
108243520 CDS
T05608
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108243520
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
DSCAM family
108243520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_5
Ig_6
V-set_CD47
Interfer-bind
Receptor_2B4
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
108243520
NCBI-ProteinID:
XP_017284479
UniProt:
A0A3Q3AK54
LinkDB
All DBs
Position
LG2:complement(12519307..12622886)
Genome browser
AA seq
2099 aa
AA seq
DB search
MWLVTLLLLYSLQEVNSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGGAPHAVLRWY
LAAGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSIIHDNEYFCTAENQAGKIRSPSIHVK
AVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPGNRFFLTSFG
TLYISEVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPTESTPNVLDSFQSGEVQVG
HSVELPCIASGYPNPTIRWLKDGRPLPADSRWTRRITGLTISDLRLEDSGNYICEVTNSF
GSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWYRNTEPVMPDQH
FSIQGAHNETLFISAAQKRHSGAYQCFASRKGQTAQDFSIILLEDGTPRIVASFSERVVV
PGEPFSLMCAAKGAPPPTITWTLDDEPVARDLSRIRSSQYTLSDGSTVSYVNVSSPQIRD
GGLYRCAARNSAGSAEYQARINVRGPPRIRPMKNITAVAGRNTFINCRVIGYPYYSINWY
KEGLLLPDNHRQVVFENGTLKLSDVQKGMDEGAYVCSVLIQPQLFITQTVYVTVKVPPLI
QPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVPSSGITIDTKEFMSSLQISKV
SLKHNGNYTCIASNDAATVSTERQLTVTVPPRFVVQPNNQDGIYGKAAILNCSVDGYPPP
KVMWKHARGALAGIGNPQQYHPVPLTGRIQIMNNGSLLIRHVLEEDRGFYLCQASNGVGS
DISKSMVLTVKIPAMITSHPNTTMAKKGHVKELNCTARGEWPIIIRWERGDTVIDPDRNP
RYSITTSPNEKTDEVLSTLKLKPAEREDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPEL
EVREVKDRSMNLRWTQRFDGNSVITSYDIEYKNKTDSWELKHATRNISPTNNQANIVDLH
PASVYSIRMYSYNAIGKSEASKELTISTEEAQPDGPPMDVILQPVTSQSIRVTWKAPRKE
LQNGVIRGYQIGYRENGLGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAG
TGPSSSEINATTLEDVPSQPPQNVRAISVTSDEAVITWAEPPRLTLHGVLKGYRVVFWAV
FPDGEWGEMQNITTTKEQVELKGLEKFTNYSIQVLAFTQAGDGVRSNVLYIQTREDYPGP
PAGIKAVPSSASSVVVSWLPPHKPNGIIRKYTIYCSSPGSGQPMPSEYEANPELLFYRIT
HLNHRQQYLIWAAAVTTAGRGNFSDKVTVEPAAKAPAKILSFGGTVTTPWMKEVRLPCSS
VGEPTPTIKWTKDSEDTAIPVSLDGQRLILTNGTLVLRSVKAEDSGYYTCTATNTLGFDT
IIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNTEEWKDVFI
SSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTHGREPQFNKDQPVFTYINS
SHARLNLPGWASGGCPITAVTLEFRPKGTWTWQTVRTNATTDVFLAELREATWYELKMKA
CNSAGCGNQSSQFATLDYDGSTIAPIKSPLKKNDDVKKLFSIGSPVILVTLGVALLFIIR
KKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIK
QIGDDKATIPVTDTEFNQTGNPQSFCTGVSVHHPALIQNTGPLIDMSDIRPGTNPVSRKS
VKSTHSIRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGITVTESDSYSASLSQDTDK
GRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITECFISDSSSDQMTTGTNDNAD
SMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAKSDYCNLPLYMKSDPFFRKQ
SEHHDPCPVVPPREASIRGLAQRVYHSQGRHVTMDSAKQQALSMGHSGLSNLSSSAASSG
GASGGGGGGGGSGGVSASSSSSTLPQRTLTMPGSSAAVAQTAAAAAAATAAAAAGASSTS
GGGGAAGATGGTPGGASSSSSKIGGSRDSLLESSSSGLGRLQKQRDGGSGAYSKSYTLV
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttacttctgctgtattctttgcaagaagtcaacagtgaggatgtt
gtctccacgcggctgtactttgtgaacgcctccctgcagcgagtgaccttctccagctcg
gtgggggtgtccctgccctgccccgcgggcggcgccccccacgccgtcctgcgctggtac
ctggctgccggagacgacatttacgacgtgccccatatccgccacgtgcatgccaacggc
accctccagctctaccctttctccccctctgcctataacagcatcatccacgacaacgag
tacttctgcactgctgagaatcaggcgggcaagattcgaagccccagcatccacgttaaa
gcagtgttcagggagccctacacagtccgtgtggccgaccagcgctccatgcggggtaac
gttgctgtgttcaagtgcctcatcccttcagctgtccaggaatacgtcagtgtggtgtcc
tgggagaaagacaccgtttccatcgtccctggtaatcgtttcttcctgacctcatttggc
actttatatatctcagaagtgcagaaggaagatgctctgtccacataccgctgcatcaca
aagcacaaatacagtggagagacccgccagagtaatggagccaggctctctgttatggac
cctacggagtccacccccaacgtgctggacagtttccagtctggtgaagtgcaggtgggt
cacagtgtggagctgccctgcatcgcctccggatacccaaaccccaccatccgatggtta
aaggatggtcggccattaccagcggactcccgctggactcgccgcatcactggcctcacc
atctctgacttgagactcgaggacagtggcaactacatctgtgaggtcaccaacagcttt
ggctccaaagaggtgacaggtcacctcaatgttatagagccactgcgggtcactttgtct
ccaaagaacttgaagacagggatcagcagtacagtcatcctctcctgtgccgttcaaggt
tccccccattttacggtgtcttggtaccgtaacacagaacccgtcatgcccgatcagcac
ttttccatccagggagctcacaatgagacgttgttcatttctgctgcacaaaaaagacac
tcgggagcctaccagtgctttgcctcaaggaagggccaaactgcccaggacttctccatc
atactgctagaagatgggacaccccgtattgttgcctccttcagtgaaagggtggtagtc
ccgggtgaaccattttccctgatgtgtgctgccaaaggagcccctccgcccaccatcacc
tggaccctggacgatgagcctgtggcccgggatctgtcacggatcagatccagccagtac
acgctctccgacgggagcacagtgagctacgtgaacgtcagcagcccacagattcgtgat
ggaggattgtatcggtgcgccgcacgaaactcggccggtagtgccgagtaccaagcgcgc
ataaacgtaagaggtcctccaaggattcggcctatgaagaacatcactgcagtggcagga
agaaacactttcataaactgccgtgtaattgggtatccttattactcaattaactggtac
aaggagggacttctgctgcctgacaaccatcgccaggtggtgtttgagaatgggacactt
aagctcagtgatgttcagaagggcatggacgagggtgcctatgtctgcagcgtgttgatc
cagccacagctattcatcactcagactgtttacgtcacagtcaaagttcccccgctgatc
cagccatttgacttccccccaacgtccatcggcaaattgatgtacatcgcctgcgtggtg
tcatctggagacatgcccattcgcatcacgtggcgtaaggatggccaggagatcgtgccc
tcctcgggtatcaccatcgacacgaaggagttcatgagctccctgcagatctccaaagta
tcgctcaaacacaatggcaactacacctgcattgctagcaatgatgctgctactgtcagc
acagagagacagctcacagtaacagtgcctcctcgatttgttgtacagcccaacaaccag
gatgggatctatggaaaggcagctatcctgaactgttccgttgatggataccctcctcct
aaagtcatgtggaagcatgccagaggtgcactcgcgggtattggaaacccacagcagtac
caccctgtgcctctgactggccgtattcagataatgaataacggctctctgctcatcaga
catgtcctagaagaagatcgtggcttctacctctgtcaggcctccaatggagtgggctca
gacattagcaagagcatggtgctcacagtgaaaatcccagcaatgatcaccagtcacccc
aacaccaccatggctaagaagggtcatgtgaaggagctgaactgtacagccagaggagaa
tggcccatcatcattcgctgggaaagaggcgacacagtgattgaccctgatcgcaacccc
cgatactccataaccactagtcccaatgagaagacggacgaggtgttgtctacactcaag
ctaaagccagcagagcgtgaggattctgtcttcttttcttgtcatgccatcaactcttac
ggagaaggacgaggccttattcagctcactgtgcaagaacctccagaccctccagagctg
gaggtccgagaagtgaaagatcgcagtatgaatctcaggtggacacagagatttgatgga
aacagtgtcattacctcctatgatattgaatataaaaataagacagattcgtgggaactg
aagcatgccactcgaaacatctcccctacaaacaatcaagccaacatcgtggaccttcac
cctgcttctgtctacagcatccggatgtattcttacaatgctataggcaagagcgaggcc
agtaaggagctcaccattagcacagaggaagcccagcctgatggtcctccgatggatgta
atccttcagccagtgacctctcaaagtatcagagtcacttggaaggctccaaggaaggag
ctacagaacggggtgatccgcggttaccagattggttacagagagaatggcctgggaagt
aacggccagtacagcattgttgagatgaaagccactggagacagtgaggtctacactctt
gacaacctgaagaagtttgctcaatacggcgtggttgtccaggccttcaacagagcaggc
accggcccttcaagctcggagatcaatgctacaacactggaagatgtgcccagtcagcct
cctcagaatgtgcgagccatctctgtaacatcggatgaggcagtgatcacatgggctgag
cctccaagactgactctccatggcgtacttaagggatatcgtgttgtgttttgggctgtc
ttcccagatggagaatggggtgaaatgcaaaatattacaaccaccaaagaacaggtggag
cttaaaggcctagagaagtttactaactacagcatccaggtgctggccttcactcaggct
ggggatggtgtccggagcaatgtcctgtacattcaaacccgagaagactatcctggaccc
ccggctggcatcaaagctgtgccatcctctgccagcagtgtcgtagtgtcgtggttaccc
cctcacaagccaaatggaatcatccgcaaatacacaatttactgctccagccccggatca
ggccaaccgatgccaagcgagtatgaagccaatccagagctgttgttttaccgaatcacc
cacctcaaccaccggcagcagtacctgatctgggctgcagccgtcaccactgccggccgc
gggaacttcagtgataaagtgaccgtggagccagcagccaaagctcctgccaaaattctg
tcatttggaggtacagttacaactccttggatgaaagaggtgcggctgccctgcagctca
gtgggtgagccaacacctaccataaaatggactaaagacagtgaggacacagcaatccca
gtgtctctcgatggacaacgtcttattctgacaaacgggacgctggtgctgcggtccgtc
aaagcagaagactctggttattacacatgcacagctaccaacacgttgggctttgacacc
attatagtcaatcttttggtacaagttcctccagatcagcctcgtctgactgtgtccacc
acctccacatcttccatcactcttgcttggataccaggagataatggaggaagctccatc
agaggttttgttctacagtactctgtggacaatacagaggaatggaaggatgttttcatc
agttctagtgagcgttctttcaagctggacaacttacgatgcgggacctggtataaagtc
aaactggctgccaagaacagcgtcggtgctggtcgcatcagtgagatcattgaggcaaag
actcatgggagagagccccagttcaacaaggatcaacctgtcttcacctacatcaactcc
agccatgcccgcctcaacctgccggggtgggccagtggaggctgtccaatcactgctgtc
acactggagttcagaccaaaaggtacgtggacgtggcagactgtgcgaaccaacgctacc
acagacgtgtttctggcggagctgcgcgaggccacctggtatgaactgaagatgaaagcg
tgtaacagcgcaggctgtggaaaccagagctcccagtttgcaacgctggactatgatggc
agcacaattgctcccattaaatctcctctgaaaaaaaatgacgatgtaaagaagctgttt
tctatcggctcccctgtgattctggtgactcttggcgttgcactgctcttcattattcgc
aagaaacgcaaagagaagaggctaaagagactaagagatgctaaaagcctggcagagatg
ctgatcagtaaaaacaaccgcagctttgacacgccggtgaaaggacctcctcagggcccc
cggttacacatcgacatccccagagtgcagttgctaattgaggacaaagagggcatcaag
caaattggtgacgacaaggctactatccctgtgacagacacagagttcaaccaaactggg
aatcctcagagcttctgcactggtgtatctgtccatcaccctgccctcatccaaaacaca
ggtcctttgatagacatgtctgacatcagaccaggaaccaacccagtgtcaaggaagagt
gtgaagtcaacccacagcatcaggaaccgatactccagtcagtggactctgaccaagtgt
caggcttccacgccagcccgcactctcacttcagactggcgcacagttggctcccagcat
ggcatcactgtcacagaaagtgacagctacagcgccagcctctcacaggacacagataag
ggacgcaacagtatggtgtccacagagagtgcctcctccacctacgaggaattggcaaga
gcgtatgagcacgccaagctagaggaacacctgcaacatgccaaatttgagattactgag
tgctttatctctgacagctcatctgatcagatgaccacaggtaccaatgacaatgcagac
agcatgacgtctatgagcacaccatcagagcctgggatctgccgtttcactgcctcacct
cccaaaccccaagactacgatcgtggcaagaatgtagctgtgcccattccacaccgcgcc
aagagtgattactgcaaccttcccctctacatgaagtcagatccctttttccgaaagcag
tcagaacaccatgacccatgtccagtggttccaccacgtgaagcctctattcgtggcctg
gcccaacgagtgtaccacagccagggtcgtcatgtgactatggactctgcaaagcagcag
gctttatccatgggccactctgggctttccaacctcagttcctctgcggcttcctccgga
ggagcatcaggaggtggtggtggaggtggtggaagtggaggagtgtctgctagctctagc
agttccacacttccccagaggactctaaccatgcctggctcctctgctgcagtggctcag
accgcagccgcagctgctgcagccactgctgctgctgctgcaggggcctcatccacctct
ggtggaggcggagcagcaggggccacaggtgggacccctggaggtgcctcctcttcttcc
tccaagataggaggatccagagactctctcctggagagcagctcctcgggcttaggcaga
ctacagaagcagagggatgggggctcgggggcttactccaagtcctacaccctggtgtag
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