Kryptolebias marmoratus (mangrove rivulus): 108244751
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Entry
108244751 CDS
T05608
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108244751 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
kmr04031
]
108244751 (trim23)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108244751 (trim23)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108244751 (trim23)
GTP-binding proteins [BR:
kmr04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
108244751 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108244751
NCBI-ProteinID:
XP_017286678
UniProt:
A0A3Q3AHJ2
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All DBs
Position
LG14:complement(839761..849969)
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AA seq
580 aa
AA seq
DB search
MAAAAVGINKQGAVATMEPCLRHGRGANGNTVKVLECGVCEDVFSLQGDKVPRLLLCGHT
VCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLERLQNGATNQSGMAD
DALKGMGECIIRCDEDESHTASMYCTVCATHLCAECSQLTHSTRTLAKHRRVPLADKPHE
KMLCPQHQVHAIEFVCLEEACQSGPLMCCVCKEYGKHQGHKHALLETEANQIRASILDMA
HCIRTFTDEVSEYSRKLVGIVQQIEGGEQIVEDGVGMAHTEHVPGTAESARSCVRAYFAD
LHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTIMLSQVSTACLHCEKTLQQDDCRVV
LAKQEINCLLETLQKQQHQFTELADHIQLDAGIPVTFTKDNRVHIGPKMEIRVVTLGLDG
AGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQA
VVFVIDSCHRDRLMEAHSELAKLLTEKELRDALLLIFANKQDVPGAVSVEEMTELLSLHK
LCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcagcagtaggaataaacaagcagggcgcagtagcgacgatggagccctgt
ctccggcacgggcggggagccaatggaaacaccgtgaaggtgctggagtgtggcgtgtgt
gaagatgtcttctccctccaaggagacaaggtccctcgcctcctgctctgcggacacacg
gtgtgccacgactgtctcacccggttgcccctccatggcagagcggtccgctgccccttt
gacagacaggtcaccgagctgggggactctggagtttggggcctgaagaagaactttgct
ctgcttgaactcttggagcgactccagaatggagccaccaaccaatcaggaatggctgat
gatgccctgaaaggcatgggagaatgtataattcgatgtgacgaggacgagagccacaca
gcgtccatgtactgcaccgtgtgtgccacccacctgtgtgctgagtgctctcagctcaca
cattccacccgcacgctggccaagcaccgccgggtgcctctggctgataaacctcatgaa
aagatgctctgccctcagcaccaggtccatgccattgagtttgtctgtctggaggaagcc
tgtcagtctggacctctcatgtgctgtgtgtgtaaggaatacggcaagcaccagggacat
aagcatgctcttcttgagactgaagcgaatcagatccgtgcatccatcctggacatggca
cactgcatccgaacttttacagatgaggtgtctgagtactcaaggaagcttgtgggcatt
gtgcaacaaattgagggcggcgagcagatcgtagaggatggagtaggcatggcacacacc
gaacacgtccctggcacagcagagagcgctcgctcctgtgtccgagcgtactttgctgac
ctccacgagaccctgtgtcggcaggaggagatggcactgagtgtggtggacgctcacgtc
agggaaaggctgatctggctgcggcagcagcaggaggacatgaccatcatgctgtctcag
gtctccactgcctgcctgcactgtgagaagactcttcaacaggatgactgcagagttgtg
ctggcgaagcaggagatcaactgtttgctggagactcttcagaagcagcagcaccagttc
actgagctggcagatcacattcagctggatgctggcatccccgtcaccttcactaaggac
aacagagtccacattggtccgaagatggagattcgtgttgtgactctcgggcttgatgga
gcaggaaaaaccaccatcctgttcaagttaaagcaagacgagttcatgcagcccatccca
actataggattcaacgtggagacagttgaatataagaatttaaaattcacaatctgggat
gttggtgggaagcacaagctcaggcccctctggaaacactattatctgaatactcaagcg
gtggtgtttgtgattgacagctgccacagggacagactcatggaggcgcacagcgagtta
gccaaactattgacagagaaggagctgcgagatgctctgctgctgatctttgcaaacaag
caggatgttcccggcgctgtgtctgtggaggagatgacggagctgctgagcctgcacaag
ctgtgctgcgggaggagctggcacatccagggctgtgatgctcggagtgggatgggtctc
cacgaggggctggactggctctccagacagctggtggctgctggggtcctggatgtggcc
taa
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